DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-39 and qorB

DIOPT Version :10

Sequence 1:NP_649234.1 Gene:ND-39 / 40272 FlyBaseID:FBgn0037001 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_418632.1 Gene:qorB / 948731 ECOCYCID:G7868 Length:286 Species:Escherichia coli


Alignment Length:366 Identity:68/366 - (18%)
Similarity:116/366 - (31%) Gaps:147/366 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VFGATGFVGRYVCNKLGKS--GTQMILPYR--------------------GDDS---------DV 101
            :.||||.:|.||...|.|:  .:|::...|                    ||::         :.
E. coli     4 ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSALQGVEK 68

  Fly   102 IRLKVTGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIA 166
            :.|..:.::||               .|.:|.||:                           ..|
E. coli    69 LLLISSSEVGQ---------------RAPQHRNVI---------------------------NAA 91

  Fly   167 REAGVERLIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFL 231
            :.|||:.:.:.|.|:.:.:|..|        .....|.|..:.|:....|::|..  :.||:   
E. coli    92 KAAGVKFIAYTSLLHADTSPLGL--------ADEHIETEKMLADSGIVYTLLRNG--WYSEN--- 143

  Fly   232 RYYAHIWRRQFRSMPLWHKGEKTVKQPVYV-------------SDVAQAIINAAKDPDSAGRIYQ 283
             |.|        |.|      ..::..|::             :|.|.|......:....|::|:
E. coli   144 -YLA--------SAP------AALEHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYE 193

  Fly   284 AVGPKRYQLSELVDWFHRLMRKDQKRWGYMRYDMRWDPTFLLKAKLNSFICP------------G 336
            ..|...:.|::|.   ..|.::..|:..|....   :..|  .|.|.|...|            |
E. coli   194 LAGDSAWTLTQLA---AELTKQSGKQVTYQNLS---EADF--AAALKSVGLPDGLADMLADSDVG 250

  Fly   337 TPIGGLHPARIEREAVTDKVLTGVPTLEDLGVTLTTMEQQV 377
            ...|||..     ::.|...|.|.||        ||:.:.|
E. coli   251 ASKGGLFD-----DSKTLSKLIGHPT--------TTLAESV 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-39NP_649234.1 NDUFA9_like_SDR_a 64..354 CDD:187579 60/341 (18%)
qorBNP_418632.1 TMR_SDR_a 2..274 CDD:187578 66/360 (18%)

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