DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-39 and COQ11

DIOPT Version :10

Sequence 1:NP_649234.1 Gene:ND-39 / 40272 FlyBaseID:FBgn0037001 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_013393.1 Gene:COQ11 / 850997 SGDID:S000004281 Length:277 Species:Saccharomyces cerevisiae


Alignment Length:273 Identity:49/273 - (17%)
Similarity:104/273 - (38%) Gaps:73/273 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VFGATGFVGRYVCNKLGKSGTQMI-------LPYRGDDSDVIRLKVTGDLGQVLFHFYNLEDPAS 125
            |||..||:|:.:|.:...||.|::       .|:..:.:|...::      :|.:...::..|.|
Yeast     7 VFGGNGFLGKRICQEAVTSGYQVVSVSRSGKAPHSNELNDKQWMQ------EVQWTAADIFKPDS 65

  Fly   126 IRDAVKHSNVVINLVGRDFETKNFK---FKDVHVNGAERI------------------------- 162
            ..:.:.::..|::.:|...|.:|:|   .|....:...|:                         
Yeast    66 YHELLNNATNVVHSLGILLENENYKQTLSKSPTYDSKSRLLSFGAGPNPLKKSSPYFTYEMMNKQ 130

  Fly   163 -ARIAREAGVERLIHLSSLNVE-ANPKDL-YV---KG----GSEWLKSKYEGELRVR--DAFPNA 215
             |.|..:...::::..|....| ||.:.. |:   ||    .|.::.||.|.|:.:.  ..:...
Yeast   131 SAIILADTFKQKILKKSKKEQEKANQRSFTYISADKGFPLIPSGYINSKREAEIELEKMQRYFRP 195

  Fly   216 TIIRPADIYGSEDRFL--RYYAHIWRRQFRSMPLWHKGEK------------TVKQPVYVSDVAQ 266
            .|:||..::......:  |.:.|      .::.|.:.|.|            .::..|....|::
Yeast   196 IIVRPGFMFDEHRNAIGPRSFIH------TALELLYCGNKFLLRNKLQLLNDLIRPTVSTQQVSK 254

  Fly   267 AIINAAKDPDSAG 279
            :::...::||..|
Yeast   255 SVLKNIENPDFKG 267

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-39NP_649234.1 NDUFA9_like_SDR_a 64..354 CDD:187579 49/273 (18%)
COQ11NP_013393.1 Rossmann-fold NAD(P)(+)-binding proteins 7..>204 CDD:473865 39/202 (19%)

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