DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-39 and AT1G32220

DIOPT Version :10

Sequence 1:NP_649234.1 Gene:ND-39 / 40272 FlyBaseID:FBgn0037001 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_564390.1 Gene:AT1G32220 / 840114 AraportID:AT1G32220 Length:296 Species:Arabidopsis thaliana


Alignment Length:294 Identity:66/294 - (22%)
Similarity:113/294 - (38%) Gaps:73/294 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YSAAAAPPED-GPRPLKTTNPAAMKRGTGGRSSFNG---IVA-------TVFGATGFVGRYVCNK 82
            :|.|:..|.. .||..|:.............:|::.   |||       .|.|..||||..:|..
plant    17 FSGASFRPRSFSPRLFKSCVKCTYAEAGLSSASWSAPIDIVADVKSERVVVLGGNGFVGSAICKA 81

  Fly    83 LGKSGTQMILPYRG-----DDSDVIRLK-VTGDLGQVLFHFYNLEDPASIRDAVKHSNVVINLVG 141
            ...:|.:::...|.     :||.:.::. ||||:      ||...|     :.:..:..|::.:|
plant    82 AISNGIEVVSVSRSGRPNFEDSWLDQVTWVTGDV------FYLNWD-----EVLLGATAVVSTIG 135

  Fly   142 RDFETKNFKFKDVHVNGAERIARI--AREAGVERLIHLSSLNVEANPKDLYVKGGSEWLKSKYEG 204
            .....:..|    .:||...:..:  |::.||.:.:.::..:....|..|    .:.:...|...
plant   136 GFGNEEQMK----RINGEANVTAVNAAKDFGVPKFVLITVHDYNLPPFIL----SNGYFTGKRNA 192

  Fly   205 ELRVRDAFP-NATIIRPADIYG-----------------------SEDRFLRYYAHIWRRQFRSM 245
            |..:...:| :..::||..|||                       |.:||:        |..||:
plant   193 EAELLSKYPTSGVVLRPGFIYGKRKVNGIEVPLDLVGEPLDKIYDSAERFI--------RPLRSL 249

  Fly   246 PLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAG 279
            |   ..:..:..||.|.|:|.|:|||.||.|..|
plant   250 P---ASDLILAPPVNVDDLALAVINAVKDDDFFG 280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-39NP_649234.1 NDUFA9_like_SDR_a 64..354 CDD:187579 59/255 (23%)
AT1G32220NP_564390.1 WcaG 64..>284 CDD:440220 56/247 (23%)

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