DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-39 and AT5G02240

DIOPT Version :10

Sequence 1:NP_649234.1 Gene:ND-39 / 40272 FlyBaseID:FBgn0037001 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_568098.1 Gene:AT5G02240 / 830851 AraportID:AT5G02240 Length:253 Species:Arabidopsis thaliana


Alignment Length:244 Identity:55/244 - (22%)
Similarity:83/244 - (34%) Gaps:77/244 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VFGATGFVGRYVCNKLGKSGTQMILPYR-----------GDDSDVIRLKVTGDLGQVLFHFYNLE 121
            |.||:|..|:.|..|| |.|:...:...           |.::||.    .||          :.
plant     9 VTGASGRTGQIVYKKL-KEGSDKFVAKGLVRSAQGKEKIGGEADVF----IGD----------IT 58

  Fly   122 DPASIRDAVKHSNVVINLV--------GRDFETK----NFKFKD------VHVNGAERIARIARE 168
            |..||..|.:..:.::.|.        |.| .||    .|.|:|      |...|.:.....|:.
plant    59 DADSINPAFQGIDALVILTSAVPKMKPGFD-PTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV 122

  Fly   169 AGVERLIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPAD----------- 222
            |||:.::.:.|:........|...|....|..|.:.|..:.|:....||||...           
plant   123 AGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVREL 187

  Fly   223 IYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVKQPVYVSDVAQAIINA 271
            :.|.:|..|:                 ...|||.:    :|||:..|.|
plant   188 LVGKDDELLQ-----------------TDTKTVPR----ADVAEVCIQA 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-39NP_649234.1 NDUFA9_like_SDR_a 64..354 CDD:187579 55/244 (23%)
AT5G02240NP_568098.1 SDR_a5 6..231 CDD:187554 55/244 (23%)

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