DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-39 and AT4G31530

DIOPT Version :10

Sequence 1:NP_649234.1 Gene:ND-39 / 40272 FlyBaseID:FBgn0037001 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001190881.1 Gene:AT4G31530 / 829280 AraportID:AT4G31530 Length:338 Species:Arabidopsis thaliana


Alignment Length:302 Identity:78/302 - (25%)
Similarity:118/302 - (39%) Gaps:64/302 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 YSAAAA-------PPEDGPRPLKTT-----NPAAMKRG-------------TGGRSSFNGIVATV 68
            ||..||       |....|.||.::     |.|::...             |...:|.:..:..|
plant    14 YSRFAATKSQIRNPLFTSPLPLPSSFFLVRNEASLSSSITPVQAFTEEAVDTSDLASSSSKLVLV 78

  Fly    69 FGATGFVGRYVCNKLGKSGTQMILPYRGDD--------SDVIRLKVT-GDLGQVLFHFYNLED-P 123
            .|.||.||:.|...|.|...:..|..|..|        .|...|:|. ||.       .|.|| .
plant    79 VGGTGGVGQLVVASLLKRNIRSRLLLRDLDKATKLFGKQDEYSLQVVKGDT-------RNAEDLD 136

  Fly   124 ASIRDAVKHSNVVINLVGRD-FETKNFKFKD----VHVNGAERIARIAREAGVERLIHLSSLNV- 182
            .|:.:.|.|   ||...|.. |.:|.:..::    |...|.:.:.. |..:.|:|::.:||:.| 
plant   137 PSMFEGVTH---VICTTGTTAFPSKRWNEENTPEKVDWEGVKNLIS-ALPSSVKRVVLVSSVGVT 197

  Fly   183 EANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADI----YGSEDRFLRYYAHIWRRQFR 243
            ::|.....:......||.|..||..:||:....|||||..:    |.|.|......|....|  |
plant   198 KSNELPWSIMNLFGVLKYKKMGEDFLRDSGLPFTIIRPGRLTDGPYTSYDLNTLLKATAGER--R 260

  Fly   244 SMPLWHKGEKTVKQPVYVSD--VAQAIINAAKDPDSAGRIYQ 283
            ::.: .:|:..|.:   ||.  ||:|.|.|.....:.|:.|:
plant   261 AVVI-GQGDNLVGE---VSRLVVAEACIQALDIEFTQGKAYE 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-39NP_649234.1 NDUFA9_like_SDR_a 64..354 CDD:187579 66/242 (27%)
AT4G31530NP_001190881.1 SDR_a5 91..299 CDD:187554 59/225 (26%)

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