DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-39 and PTAC16

DIOPT Version :10

Sequence 1:NP_649234.1 Gene:ND-39 / 40272 FlyBaseID:FBgn0037001 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_566886.2 Gene:PTAC16 / 823831 AraportID:AT3G46780 Length:510 Species:Arabidopsis thaliana


Alignment Length:265 Identity:57/265 - (21%)
Similarity:92/265 - (34%) Gaps:77/265 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 LKTTNPAAMKRGTG-----GRSSFNGIVATVF--GATGFVGRYVCNKLGKSG--TQMILPYRGDD 98
            :|:..|......||     .|....|   |:|  ||||..|..:...|.:.|  .:..:|..|..
plant    67 MKSLIPVVTNPSTGLVFGNNRKKDPG---TIFVAGATGQAGIRIAQTLLQRGFSVRAGVPDLGAA 128

  Fly    99 SDVIRLKVT-----GD----LGQVLFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNFKFKDV 154
            .|:.|:..|     .|    |..|...|   :|..||..|:.::..|:..||   .|:|.....|
plant   129 QDLARVAATYKILSNDEVKRLNAVQSPF---QDAESIAKAIGNATKVVVTVG---ATENGPDAQV 187

  Fly   155 HVNGAERIARIAREAGVERLIHLSSLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIR 219
            ..:.|..:.:.|..|||.   |::.:                     |:|.:             
plant   188 STSDALLVVQAAELAGVS---HVAIV---------------------YDGTI------------- 215

  Fly   220 PADIYGSEDRFLRYYAHIWRRQFRSMPLWHKGEKTVK---QPVYVSDVAQAIINAAKDPD-SAGR 280
            ....|...|....::.:::.   :|.||      |:.   :.|..:|||..:|..:...| |..:
plant   216 SGSTYNVLDGITSFFGNLFA---KSQPL------TISDLIEKVAQTDVAYTLIKTSLTEDFSPEK 271

  Fly   281 IYQAV 285
            .|..|
plant   272 AYNVV 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-39NP_649234.1 NDUFA9_like_SDR_a 64..354 CDD:187579 51/239 (21%)
PTAC16NP_566886.2 PLN03209 66..>341 CDD:178748 57/265 (22%)

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