DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-39 and AT2G20360

DIOPT Version :9

Sequence 1:NP_001262116.1 Gene:ND-39 / 40272 FlyBaseID:FBgn0037001 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_565469.1 Gene:AT2G20360 / 816555 AraportID:AT2G20360 Length:402 Species:Arabidopsis thaliana


Alignment Length:257 Identity:109/257 - (42%)
Similarity:165/257 - (64%) Gaps:13/257 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 KRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGDLGQVLFH 116
            ::|||||||.:||||||||||||:|||:..:|.|.|:|:::|:||.:.....||:.||||||:..
plant    57 RKGTGGRSSVSGIVATVFGATGFLGRYLVQQLAKMGSQVLVPFRGSEDSPRHLKLMGDLGQVVPM 121

  Fly   117 FYNLEDPASIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIARE-AGVERLIHLSSL 180
            .::..|..||:..:..:||||||:||::||:||.|:|.:.:.||::|.:|:| .|:.|.|.:|.|
plant   122 KFDPRDEDSIKAVMAKANVVINLIGREYETRNFSFEDANHHIAEKLALVAKEHGGIMRYIQVSCL 186

  Fly   181 NVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFRSM 245
            ...       |...|..|::|...|..|.:|.|.|||:|||.:.|:|||.|..:: ::.:::..:
plant   187 GAS-------VSSPSRMLRAKAAAEEAVLNALPEATIMRPATMIGTEDRILNPWS-MFVKKYGFL 243

  Fly   246 PLWHKGEKTVK-QPVYVSDVAQAIINAAKDPDSA-GRIYQAVGPKRYQLSELVDWFHRLMRK 305
            ||  .|..|.| |||||.|||.||:.|.||..|: |:.|:..||..:...||.:..:.::|:
plant   244 PL--IGGGTTKFQPVYVVDVAAAIVAALKDDGSSMGKTYELGGPDVFTTHELAEIMYDMIRE 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-39NP_001262116.1 NDUFA9_like_SDR_a 64..354 CDD:187579 101/245 (41%)
Epimerase 66..282 CDD:279681 93/218 (43%)
AT2G20360NP_565469.1 NDUFA9_like_SDR_a 69..350 CDD:187579 101/245 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 146 1.000 Domainoid score I1467
eggNOG 1 0.900 - - E1_COG0702
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3666
Inparanoid 1 1.050 186 1.000 Inparanoid score I1409
OMA 1 1.010 - - QHG53586
OrthoDB 1 1.010 - - D721605at2759
OrthoFinder 1 1.000 - - FOG0004832
OrthoInspector 1 1.000 - - oto3242
orthoMCL 1 0.900 - - OOG6_101633
Panther 1 1.100 - - LDO PTHR12126
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3413
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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