DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-39 and Ndufa9

DIOPT Version :9

Sequence 1:NP_001262116.1 Gene:ND-39 / 40272 FlyBaseID:FBgn0037001 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_079634.2 Gene:Ndufa9 / 66108 MGIID:1913358 Length:377 Species:Mus musculus


Alignment Length:365 Identity:162/365 - (44%)
Similarity:226/365 - (61%) Gaps:35/365 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 AAMKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGDLGQV 113
            |.:..|.|||||.:|:||||||||||:||||.|.||:.|:|:|:|||.|..|::.|::.|||||:
Mouse    39 AVIPHGKGGRSSVSGVVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDVYDIMHLRLMGDLGQL 103

  Fly   114 LFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAGVERLIHLS 178
            .|..::..|..|||.||:||||||||:||::||:||.|:||.||....||:.::||||||.||:|
Mouse   104 TFLEWDARDKDSIRKAVQHSNVVINLIGREWETRNFDFEDVFVNIPRAIAQASKEAGVERFIHVS 168

  Fly   179 SLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFR 243
            .||..       :|..|:.|:||..||..||..||.|.||||:||:|.|||||.::|:.  |.|.
Mouse   169 HLNAS-------MKSSSKSLRSKAVGEKEVRSVFPEAIIIRPSDIFGREDRFLNHFANY--RWFL 224

  Fly   244 SMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRIYQAVGPKRYQLSELVDWFHRLMRKDQK 308
            ::||...|.|||||||||:||::.|:||.||||:.|:.:...||.||.|..||.:...:..:.  
Mouse   225 AVPLVSLGFKTVKQPVYVADVSKGIVNATKDPDAVGKTFAFTGPNRYLLFHLVKYIFGMTHRT-- 287

  Fly   309 RWGYMRYDMRWDPTFLLKAKLNSFICPGTPIGGLHP-------ARIEREAVTDKVLTGVPTLEDL 366
               ::.|.:   |.|:.     |:|   ..:.||.|       .::||..::|.:.|.:|.||||
Mouse   288 ---FIPYPL---PLFVY-----SWI---GKLFGLSPFEPWTTKDKVERIHISDVMPTDLPGLEDL 338

  Fly   367 GVTLTTMEQQVPWELRPYRAALYYDAELGEFETPSPPKCI 406
            ||..|.:|.:....||.:|...:..:|:   |...|.|.:
Mouse   339 GVQPTPLELKSIEVLRRHRTYRWLSSEI---EETKPAKTV 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-39NP_001262116.1 NDUFA9_like_SDR_a 64..354 CDD:187579 136/296 (46%)
Epimerase 66..282 CDD:279681 118/215 (55%)
Ndufa9NP_079634.2 NDUFA9_like_SDR_a 54..326 CDD:187579 136/296 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850718
Domainoid 1 1.000 142 1.000 Domainoid score I4678
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3666
Inparanoid 1 1.050 272 1.000 Inparanoid score I2979
Isobase 1 0.950 - 1 Normalized mean entropy S5084
OMA 1 1.010 - - QHG53586
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004832
OrthoInspector 1 1.000 - - oto92359
orthoMCL 1 0.900 - - OOG6_101633
Panther 1 1.100 - - LDO PTHR12126
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4275
SonicParanoid 1 1.000 - - X3413
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.880

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