DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-39 and ndufa9

DIOPT Version :9

Sequence 1:NP_001262116.1 Gene:ND-39 / 40272 FlyBaseID:FBgn0037001 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001011432.1 Gene:ndufa9 / 496917 XenbaseID:XB-GENE-949551 Length:377 Species:Xenopus tropicalis


Alignment Length:351 Identity:153/351 - (43%)
Similarity:232/351 - (66%) Gaps:24/351 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 AAMKRGTGGRSSFNGIVATVFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLKVTGDLGQV 113
            |.:..|..|||:.:|:|||||||:||:||||.|:||:.|:|:|:|||.|..|::.|:..|||||:
 Frog    39 AVIPHGKPGRSAVSGVVATVFGASGFLGRYVVNRLGRIGSQVIIPYRCDPYDIMYLRPMGDLGQL 103

  Fly   114 LFHFYNLEDPASIRDAVKHSNVVINLVGRDFETKNFKFKDVHVNGAERIARIAREAGVERLIHLS 178
            :|..::.:|..:||.|:::|||||||:|:::|||||.::||.||....:|.:|||||||:.||:|
 Frog   104 IFMDWDSKDKDTIRKALQNSNVVINLIGKEWETKNFSYEDVFVNIPRDLALLAREAGVEKFIHMS 168

  Fly   179 SLNVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNATIIRPADIYGSEDRFLRYYAHIWRRQFR 243
            .||.:       :|..|::|::|..||..||:|||:|.|::|::|||.||||..:||::  |.|.
 Frog   169 HLNAD-------LKSPSKYLRNKAVGEDAVREAFPDAIIMKPSEIYGREDRFFNHYANM--RWFG 224

  Fly   244 SMPLWHKGEKTVKQPVYVSDVAQAIINAAKDPDSAGRIYQAVGPKRYQLSELVDWFHRLMRKDQK 308
            .:||...|:|:|||||||.|||:||:||..||:|.|:.|..|||.||.|.:||::...:..:.  
 Frog   225 GVPLIAFGKKSVKQPVYVVDVAKAILNAIHDPESKGKTYALVGPNRYLLHDLVEYIFAVTHRP-- 287

  Fly   309 RWGYMRYDMRWDPTFLLKAK---LNSFICPGTPIGGLHPARIEREAVTDKVLTGVPTLEDLGVTL 370
               ::.|.:. .|.:.|.::   :|.|. |.|.     ..:::|...|||....:|.|||||:..
 Frog   288 ---FVPYPIP-RPLYRLISRFFEINPFE-PWTT-----RDKVDRFHTTDKKFPDLPGLEDLGIVP 342

  Fly   371 TTMEQQVPWELRPYRAALYYDAELGE 396
            |::||:....||.:|...:.:|:|.|
 Frog   343 TSVEQKGIEVLRRHRRYRWLEADLDE 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-39NP_001262116.1 NDUFA9_like_SDR_a 64..354 CDD:187579 129/292 (44%)
Epimerase 66..282 CDD:279681 111/215 (52%)
ndufa9NP_001011432.1 NDUFA9_like_SDR_a 54..326 CDD:187579 129/292 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 217 1.000 Domainoid score I2632
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H3666
Inparanoid 1 1.050 269 1.000 Inparanoid score I2951
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D465933at33208
OrthoFinder 1 1.000 - - FOG0004832
OrthoInspector 1 1.000 - - oto102665
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3413
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.060

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