DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-39 and CG9471

DIOPT Version :10

Sequence 1:NP_649234.1 Gene:ND-39 / 40272 FlyBaseID:FBgn0037001 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_649943.2 Gene:CG9471 / 41197 FlyBaseID:FBgn0037749 Length:204 Species:Drosophila melanogaster


Alignment Length:119 Identity:27/119 - (22%)
Similarity:47/119 - (39%) Gaps:21/119 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VFGATGFVGRYVCNKLGKSGTQMILPYRGDDSDVIRLK-----VTGDLGQVLFHFYNLEDPASIR 127
            :.|.||..|....:...:.|..:.|.||.:.:...|.|     |.||:       .|.||...:.
  Fly     6 IIGGTGMTGECAVDHALQKGLSVKLLYRSEKTVPERFKSKVELVKGDV-------TNYEDVQRVI 63

  Fly   128 DAVKHSNVVINLVGRDFETKNFKFKDVHVN-GAERIARIAREAGVERL-IHLSS 179
            :.|....|::.       |:|.......:: |.|.:.:..:||.:.:. |.:||
  Fly    64 EGVDAVAVILG-------TRNKLEATTELSRGTENLIKAMKEAKLTKFSIVMSS 110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-39NP_649234.1 NDUFA9_like_SDR_a 64..354 CDD:187579 27/119 (23%)
CG9471NP_649943.2 BVR-B_like_SDR_a 3..197 CDD:187555 27/119 (23%)

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