DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-39 and C33F10.4

DIOPT Version :9

Sequence 1:NP_001262116.1 Gene:ND-39 / 40272 FlyBaseID:FBgn0037001 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_494860.2 Gene:C33F10.4 / 173827 WormBaseID:WBGene00016353 Length:340 Species:Caenorhabditis elegans


Alignment Length:64 Identity:14/64 - (21%)
Similarity:24/64 - (37%) Gaps:19/64 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 ERIARIAREAGVERLIHLSSL-------NVEANPKDLYVKGGSEWLKSKYEGELRVRDAFPNAT 216
            :||.||....|..|.:|..::       |:...|.       .:|:.|     :.....|||::
 Worm    83 KRIDRIVATYGEIRYLHDGTILLLVTIHNITNQPM-------IDWVIS-----INPTSIFPNSS 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-39NP_001262116.1 NDUFA9_like_SDR_a 64..354 CDD:187579 14/64 (22%)
Epimerase 66..282 CDD:279681 14/64 (22%)
C33F10.4NP_494860.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0702
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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