DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment isoQC and qpctl

DIOPT Version :9

Sequence 1:NP_788550.1 Gene:isoQC / 40270 FlyBaseID:FBgn0036999 Length:354 Species:Drosophila melanogaster
Sequence 2:XP_002932645.1 Gene:qpctl / 100379672 XenbaseID:XB-GENE-940804 Length:382 Species:Xenopus tropicalis


Alignment Length:371 Identity:137/371 - (36%)
Similarity:194/371 - (52%) Gaps:59/371 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 PRPRKKIYNLGA---------CFELVDIP-KISYNPSELSE------PRFLEYSNLSDKLHLREA 67
            ||..:.::.|||         .:|..::. |:..|..:.:.      |:.:..|      |:|:.
 Frog    23 PRKSRSLFVLGAGVLIGAGILLWENWEVSGKVRENGRKETRSGREIVPKAMSIS------HIRQI 81

  Fly    68 IDKI-------------LIPRVVGTTNHSIVREYIVQSLRDLD--WDVEVNSFHDHAPIKGKLHF 117
            :.|:             ||.|..|:..:.:|||.|...|:.|.  |.|:::.|....| :|.|.|
 Frog    82 VSKVNSDRLWSSFLKPMLIERPPGSEGNVMVRELISTHLQTLSSGWTVDLDLFDAVTP-RGSLSF 145

  Fly   118 HNIIATLNPNAERYLVLSCHYDSK-YMP---GVEFLGATDSAVPCAMLLNLAQVLQEQLKPLKK- 177
            .:::|||:|.|.:.|||:||.||| ::|   |..|:|||||||||:::|.....|..:|:.||. 
 Frog   146 GSVVATLDPYAPQRLVLACHLDSKWFLPDRRGRPFIGATDSAVPCSLILEAVTALDSELRKLKDR 210

  Fly   178 -SKLSLMLLFFDGEEAFEEWGPKDSIYGARHLAKKWHHE-------GKLDRIDMLVLLDLLGAPD 234
             |.|:|.|.|.|||||..||...||:|||||||::....       ..|..|.:.||||||||||
 Frog   211 GSTLTLQLFFLDGEEALAEWTATDSLYGARHLAQRLEKSKLPGGDGNHLSAIALFVLLDLLGAPD 275

  Fly   235 PAFYSFFENTESWYMRIQSVETRLAKLQLLERYASSGVAQRDPTRYFQSQAMRSSFIEDDHIPFL 299
            ....:.|..|.|.::|:.::|.||..|.||:.:.|.....| |..|:..       :||||||||
 Frog   276 LLILNHFSETRSHFLRLCTIEKRLHNLGLLQSHPSEHTYFR-PDLYYGP-------VEDDHIPFL 332

  Fly   300 RRNVPILHLIPVPFPSVWHTPDDNASVIDYATTDNLALIIRLFALE 345
            |:.|||||:|..|||:||||.||....:...|..||..|:..|..|
 Frog   333 RKGVPILHVISTPFPAVWHTHDDTEENLHRPTVINLCHILVTFLSE 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
isoQCNP_788550.1 M28_QC_like 56..346 CDD:193501 128/318 (40%)
qpctlXP_002932645.1 M28_QC_like 76..378 CDD:349876 127/316 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 250 1.000 Inparanoid score I3151
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1257754at2759
OrthoFinder 1 1.000 - - FOG0001509
OrthoInspector 1 1.000 - - mtm9550
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1074
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

Return to query results.
Submit another query.