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Protein Alignment CG5969 and vma21
DIOPT Version :10
| Sequence 1: | NP_788549.1 |
Gene: | CG5969 / 40269 |
FlyBaseID: | FBgn0036998 |
Length: | 105 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001343090.1 |
Gene: | vma21 / 9407312 |
PomBaseID: | SPCC1235.16 |
Length: | 88 |
Species: | Schizosaccharomyces pombe |
| Alignment Length: | 85 |
Identity: | 19/85 - (22%) |
| Similarity: | 37/85 - (43%) |
Gaps: | 21/85 - (24%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 18 QTRQQSHDSQDYSSFKTVLF----YCMLIVFLPVLTFF-----VLKGFVLDQFLDISEVKVNIAS 73
:.:.|..|:.:.|....||. :.:.:..||::|:| :.||: ..:.:
pombe 2 ERKSQVSDTNNNSIPTNVLLKFVGFSVALFTLPLITYFWTLKTLFKGY------------QTLYA 54
Fly 74 AVGAVVALHIALGLYIYRAY 93
.:.|.|.::|.|.|||..|:
pombe 55 GLSAAVMVNIILALYIVAAF 74
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| CG5969 | NP_788549.1 |
VMA21 |
30..93 |
CDD:462801 |
16/71 (23%) |
| vma21 | NP_001343090.1 |
VMA21 |
19..74 |
CDD:462801 |
15/66 (23%) |
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