DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdh and rfaD

DIOPT Version :10

Sequence 1:NP_649230.1 Gene:Tdh / 40268 FlyBaseID:FBgn0036997 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_418076.1 Gene:rfaD / 948134 ECOCYCID:EG10838 Length:310 Species:Escherichia coli


Alignment Length:213 Identity:39/213 - (18%)
Similarity:81/213 - (38%) Gaps:37/213 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ILITGGLGQLGIECAKLLRTQYGSQNVILSDIIKPSQSVLENGPYIFADILDFKG-LQKIVVDHR 111
            |::|||.|.:|....|.|..: |..::::.|.:|.....:.......||.:|.:. |.:|:....
E. coli     2 IIVTGGAGFIGSNIVKALNDK-GITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQIMAGEE 65

  Fly   112 ---IDWLIHFSALLSAVGEQNVPLAVRVNIEGVHNVIELAKQYKLRIFVPSTIGAFGPDSPRNPT 173
               ::.:.|..| .|:..|.:....:..|.:....::....:.::.....|:...:| ....:..
E. coli    66 FGDVEAIFHEGA-CSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYG-GRTSDFI 128

  Fly   174 PNVTIQRPRTIYGVSK-------------VHAELIGEYYYHKFGLDFRCLRFPGVISSDPPGGGT 225
            .:...::|..:||.||             .:::::|..|::.:|               |..|..
E. coli   129 ESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYG---------------PREGHK 178

  Fly   226 TDYAVAVFH--EALRNGK 241
            ...|...||  ..|.||:
E. coli   179 GSMASVAFHLNTQLNNGE 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TdhNP_649230.1 TDH_SDR_e 47..351 CDD:187580 39/213 (18%)
rfaDNP_418076.1 rfaD 1..308 CDD:182998 39/213 (18%)

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