DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tdh and arnA

DIOPT Version :10

Sequence 1:NP_649230.1 Gene:Tdh / 40268 FlyBaseID:FBgn0036997 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_416758.1 Gene:arnA / 947683 ECOCYCID:G7168 Length:660 Species:Escherichia coli


Alignment Length:399 Identity:87/399 - (21%)
Similarity:136/399 - (34%) Gaps:100/399 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ITPIASQLVQRRAFHQVPRESRPP--------KILITGGLGQLGIECA-KLLRTQ----YGSQNV 74
            ||...|||.|.....|..|.:..|        ::||.|..|.:|.... :|||..    ||..  
E. coli   285 ITMQGSQLAQTLGLVQGSRLNSQPACTARRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLD-- 347

  Fly    75 ILSDIIK-----PSQSVLENGPYIFADILDFKGLQKIVVDH--RIDWLIHFSALLSAVGEQNVPL 132
            |.||.|.     |....:|....|.::.:::         |  :.|.::...|:.:.:.....||
E. coli   348 IGSDAISRFLNHPHFHFVEGDISIHSEWIEY---------HVKKCDVVLPLVAIATPIEYTRNPL 403

  Fly   133 AV-RVNIEGVHNVIELAKQYKLRIFVPSTIGAFGPDSPR---NPTPNV---TIQRPRTIYGVSKV 190
            .| .::.|....:|....:|:.||..|||...:|..|.:   ....|:   .:.:||.||.|||.
E. coli   404 RVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ 468

  Fly   191 HAELIGEYYYHKFGLDFRCLR-FPGVISSDPPGGGTTDYAVAVFHEALRNGKYTCYLRPDTRLPM 254
            ..:.:...|..|.||.|...| |..:       |...|..     .|.|.|.    .|..|:|.:
E. coli   469 LLDRVIWAYGEKEGLQFTLFRPFNWM-------GPRLDNL-----NAARIGS----SRAITQLIL 517

  Fly   255 MYIE--------------------DCLRALLEFMRAPNEQLKRRVYNV------TAMSFTPEELF 293
            ..:|                    |.:.||...:.....:....:.|:      .::....|.|.
E. coli   518 NLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLL 582

  Fly   294 AQLGKHVPNLHV------------TYKPDSRQLIADAWPQVFDDSDARRDWHWQHKYDLSNLV-- 344
            |...||....|.            :|.....|.:....|.:   .:|.|...|:.|.|:...:  
E. coli   583 ASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSI---RNAHRCLDWEPKIDMQETIDE 644

  Fly   345 --DFMIKDV 351
              ||.::.|
E. coli   645 TLDFFLRTV 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TdhNP_649230.1 TDH_SDR_e 47..351 CDD:187580 77/365 (21%)
arnANP_416758.1 PRK08125 1..660 CDD:236156 87/399 (22%)

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