DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdh and UXS3

DIOPT Version :10

Sequence 1:NP_649230.1 Gene:Tdh / 40268 FlyBaseID:FBgn0036997 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_001078768.1 Gene:UXS3 / 836047 AraportID:AT5G59290 Length:357 Species:Arabidopsis thaliana


Alignment Length:364 Identity:83/364 - (22%)
Similarity:140/364 - (38%) Gaps:70/364 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PVASPIPLPRITPIASQLVQRRAFHQVPRESRPPKILITGGLGQLGIECAKLLRTQYGSQNVILS 77
            |..||.||..     |:..|...           :|||:||.|.:|......|.....::.|:..
plant    28 PPPSPSPLRN-----SKFCQPNM-----------RILISGGAGFIGSHLVDKLMENEKNEVVVAD 76

  Fly    78 DIIKPSQSVLEN--GPYIFADILDFKGLQKIVVDHRIDWLIHFSALLSAVGEQNVPL-AVRVNIE 139
            :....|:..|:.  |...| :::.....:.::::  :|.:.|.:...|.:..:..|: .::.|:.
plant    77 NYFTGSKENLKKWIGHPRF-ELIRHDVTEPLLIE--VDRIYHLACPASPIFYKYNPVKTIKTNVI 138

  Fly   140 GVHNVIELAKQYKLRIFVPSTIGAFGPDSPRNPTP-----NVTIQRPRTIYGVSKVHAELIGEYY 199
            |..|::.|||:...||.:.||...:| |...:|.|     ||.....|:.|...|..||.:...|
plant   139 GTLNMLGLAKRVGARILLTSTSEVYG-DPLIHPQPESYWGNVNPIGVRSCYDEGKRVAETLMFDY 202

  Fly   200 YHKFGLDFRCLRFPGVISSDPPGGGTTDYAVA--VFHEALRNGKYTCYLRPDTRL-PMMYIEDCL 261
            :.:.|::.|..|   :.::..|.....|..|.  ...:||| |:.....:|.|:. ...|:.|.:
plant   203 HRQHGIEIRIAR---IFNTYGPRMNIDDGRVVSNFIAQALR-GEALTVQKPGTQTRSFCYVSDMV 263

  Fly   262 RALLEFMRA----------PNEQLKRRVYNVTAMSFTPEELFAQLGKHVPNLHVTYK-----PDS 311
            ..|:..|..          |.|             ||..|| |:..|.:.|..:..|     || 
plant   264 DGLIRLMEGNDTGPINIGNPGE-------------FTMVEL-AETVKELINPSIEIKMVENTPD- 313

  Fly   312 RQLIADAWPQVFDDSDARRDWHWQHKYDLSNLVDFMIKD 350
                 |...:..|.|.|:....|:.|..|...:..|.:|
plant   314 -----DPRQRKPDISKAKEVLGWEPKVKLREGLPLMEED 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TdhNP_649230.1 TDH_SDR_e 47..351 CDD:187580 76/330 (23%)
UXS3NP_001078768.1 UGD_SDR_e 45..349 CDD:187541 76/342 (22%)

Return to query results.
Submit another query.