DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdh and AXS1

DIOPT Version :10

Sequence 1:NP_649230.1 Gene:Tdh / 40268 FlyBaseID:FBgn0036997 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_180353.1 Gene:AXS1 / 817332 AraportID:AT2G27860 Length:389 Species:Arabidopsis thaliana


Alignment Length:373 Identity:75/373 - (20%)
Similarity:133/373 - (35%) Gaps:94/373 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 RPPKILITGGLGQLGIE-CAKLLRTQYGSQNVILSDIIKPS-QSVLENGPYIFADILDFKG---L 103
            :|..|.:.|..|.:|.. |.|||...  ...|:..|:.... :.:||      .|.:::.|   .
plant    16 QPLTICMIGAGGFIGSHLCEKLLTET--PHKVLALDVYNDKIKHLLE------PDTVEWSGRIQF 72

  Fly   104 QKIVVDH---------RIDWLIHFSALLSAVGEQNVPL-AVRVNIEGVHNVIELAKQYKLRIF-- 156
            .:|.:.|         ..|.:|:.:|:.:.......|| .:..|......|::...:...|:.  
plant    73 HRINIKHDSRLEGLVKMADLIINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHF 137

  Fly   157 -----VPSTIGAFGP-DSPRNPTPNV-------------TIQRPRTIYGVSKVHAELIGEYYY-- 200
                 ...|||:|.| |.|....|..             :|::.|..|..:|   :||....|  
plant   138 STCEVYGKTIGSFLPKDHPLRDDPAFYVLKEDISPCIFGSIEKQRWSYACAK---QLIERLVYAE 199

  Fly   201 -HKFGLDFRCLR-----------FPGVISSDPPGGGTTDYAVAVFHEALRNGKYTCYLRPDTRLP 253
             .:.||:|..:|           .||:   |.|..|.........:..||..........:::..
plant   200 GAENGLEFTIVRPFNWIGPRMDFIPGI---DGPSEGVPRVLACFSNNLLRREPLKLVDGGESQRT 261

  Fly   254 MMYIEDCLRALLEFMRAPNEQLKRRVYN---------VTAMSFTPEELFAQLGK----HVPNLHV 305
            .:||.|.:.|:|..:..| |:....::|         |..::....|::|::..    ..|.:.|
plant   262 FVYINDAIEAVLLMIENP-ERANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEGAIESPTVDV 325

  Fly   306 TYKPDSRQLIADAWPQVFDDSDAR--------RDWHWQHKYDLSNLVD 345
            :.|        :.:.:.:||||.|        |...|..|..|.:|::
plant   326 SSK--------EFYGEGYDDSDKRIPDMTIINRQLGWNPKTSLWDLLE 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TdhNP_649230.1 TDH_SDR_e 47..351 CDD:187580 74/370 (20%)
AXS1NP_180353.1 PLN02427 4..389 CDD:178047 75/373 (20%)

Return to query results.
Submit another query.