DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdh and CG5854

DIOPT Version :10

Sequence 1:NP_649230.1 Gene:Tdh / 40268 FlyBaseID:FBgn0036997 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_651196.1 Gene:CG5854 / 42831 FlyBaseID:FBgn0039130 Length:371 Species:Drosophila melanogaster


Alignment Length:390 Identity:77/390 - (19%)
Similarity:134/390 - (34%) Gaps:101/390 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 SRPPKILITGGLGQLGIECAKLLRTQYGSQNVILSDIIKPSQSVL-ENGPYIF---------ADI 97
            |..|.:||.||.|.:|...|..|.....:|.:.|:|...|..:.| |....:|         |::
  Fly     2 SEKPTVLILGGCGFIGRNLATYLLDNELAQEIRLADKTPPQMAWLNEEQTRVFESDRVEFCSANL 66

  Fly    98 LDFKGLQKIVVDHRID---WLIHFSALLSAVGEQNVPLAVRVNIEGV----HNVIELAKQYKLRI 155
            ::....:.....|...   |.|    :::...|........|..||:    .|....|...:::.
  Fly    67 INAASCKAAFAPHPTTGRAWDI----VINCAAETRANQDDAVYKEGILKLSLNCANEAANQRVKR 127

  Fly   156 FVPSTIGAFGPDSPRNPTPNVTIQRPRTIYGVS----KVHAEL--IGEYYYHKFGLDFRCLRFPG 214
            :|..:.|... .|.:.|........|.|  ||:    ||..||  |.:       |.:..:|.|.
  Fly   128 YVELSSGCVN-SSEKTPLKEDCKTDPWT--GVAKQKLKVEKELANIDD-------LSYTVVRLPV 182

  Fly   215 VISSDPPGGGTTDY-----AVAVFHEALRNGKYTCYLRPDTRLPMMYIEDCLRALLEFMRAPNEQ 274
            |.     |.|...|     .:|..::.| |...........||..:::.|...|:.:..::|  :
  Fly   183 VY-----GIGDKRYLMPRIIIAAIYKYL-NETMKLLWNDAMRLNTVHVSDVCAAVWQLAQSP--K 239

  Fly   275 LKRRVYNVTAMSFTPEELFAQL------------GKHVPNLHVTYKPDSRQLIAD----AWPQV- 322
            ...::||:...|.:.:...:.|            |..:.||...|..|:...|.|    .|.:: 
  Fly   240 TAGQIYNICDDSASTQGTISNLLVDIFDINLDFFGLVMSNLAKLYPTDTVSEINDKHMAPWAEIC 304

  Fly   323 -------------FDDSDARRDWHWQHKY---DLSNLVDF------------MIKDVQDNYINVQ 359
                         .|:...      |||:   |.:.|.||            ::.::.::|:..|
  Fly   305 QRNGIDNTPLTPYLDEEQL------QHKHLYLDNTKLKDFGYVLQHPKVTRELLMEMINDYVKQQ 363

  Fly   360  359
              Fly   364  363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TdhNP_649230.1 TDH_SDR_e 47..351 CDD:187580 73/376 (19%)
CG5854NP_651196.1 WcaG 6..267 CDD:440220 57/282 (20%)

Return to query results.
Submit another query.