DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5955 and Tdh

DIOPT Version :9

Sequence 1:NP_649230.1 Gene:CG5955 / 40268 FlyBaseID:FBgn0036997 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_001099514.1 Gene:Tdh / 290315 RGDID:1310214 Length:373 Species:Rattus norvegicus


Alignment Length:324 Identity:199/324 - (61%)
Similarity:248/324 - (76%) Gaps:12/324 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 HQVP----------RESRPPKILITGGLGQLGIECAKLLRTQYGSQNVILSDIIKPSQSVLENGP 91
            |:||          .|:.||::||||||||||:..|.|||.::|..|||||||.||...|..:||
  Rat    37 HRVPANVNFHSTSFSEAEPPRVLITGGLGQLGVGLANLLRKRFGKDNVILSDIRKPPAHVFHSGP 101

  Fly    92 YIFADILDFKGLQKIVVDHRIDWLIHFSALLSAVGEQNVPLAVRVNIEGVHNVIELAKQYKLRIF 156
            :|:|:|||:|.|::|||:|||.||.|:|||||||||.|||||..|||.|:||::::|.:|.:|:|
  Rat   102 FIYANILDYKNLREIVVNHRISWLFHYSALLSAVGEANVPLARDVNITGLHNILDVAAEYNVRLF 166

  Fly   157 VPSTIGAFGPDSPRNPTPNVTIQRPRTIYGVSKVHAELIGEYYYHKFGLDFRCLRFPGVISSD-P 220
            ||||||||||.|||||||::.:|||||||||||||.||:|||||:::||||||||:||:||:| .
  Rat   167 VPSTIGAFGPTSPRNPTPDLCVQRPRTIYGVSKVHTELMGEYYYYRYGLDFRCLRYPGIISADSQ 231

  Fly   221 PGGGTTDYAVAVFHEALRNGKYTCYLRPDTRLPMMYIEDCLRALLEFMRAPNEQLKRRVYNVTAM 285
            ||||||||||.:||.|.:||.:.|.|:..||||||||.|||||.||.|.||.|.|..|.||:.||
  Rat   232 PGGGTTDYAVQIFHAAAKNGTFECNLKASTRLPMMYISDCLRATLEVMEAPAECLSMRTYNINAM 296

  Fly   286 SFTPEELFAQLGKHVPNLHVTYKPDS-RQLIADAWPQVFDDSDARRDWHWQHKYDLSNLVDFMI 348
            |||||||...|.||.|:..:||..|. ||.||::||.:.|||:||:||.|:|.:||..||..|:
  Rat   297 SFTPEELALALRKHAPDFQITYCVDPLRQAIAESWPMILDDSNARKDWGWKHDFDLPELVATML 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5955NP_649230.1 WcaG 47..355 CDD:223528 193/304 (63%)
TDH_SDR_e 47..351 CDD:187580 193/304 (63%)
TdhNP_001099514.1 TDH_SDR_e 57..363 CDD:187580 193/304 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339851
Domainoid 1 1.000 336 1.000 Domainoid score I1085
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H10987
Inparanoid 1 1.050 418 1.000 Inparanoid score I1751
OMA 1 1.010 - - QHG60810
OrthoDB 1 1.010 - - D1327602at2759
OrthoFinder 1 1.000 - - FOG0005649
OrthoInspector 1 1.000 - - oto97451
orthoMCL 1 0.900 - - OOG6_104776
Panther 1 1.100 - - LDO PTHR42687
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4627
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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