DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdh and F13D11.4

DIOPT Version :10

Sequence 1:NP_649230.1 Gene:Tdh / 40268 FlyBaseID:FBgn0036997 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_508978.3 Gene:F13D11.4 / 184416 WormBaseID:WBGene00017429 Length:343 Species:Caenorhabditis elegans


Alignment Length:355 Identity:77/355 - (21%)
Similarity:140/355 - (39%) Gaps:74/355 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KILITGGLGQLGIECAK-LLRTQYGSQNVILSDI-----IKPSQSV-----LENGPYIFADILDF 100
            |:|:||..|.:|..|.: ||:..|..:..: .|:     ::|.:.:     ||   .:.||:||.
 Worm     7 KVLVTGASGFIGTHCVEILLKNGYRVRGTV-RDLNNKAKVQPIKKLDKKNHLE---LVEADLLDS 67

  Fly   101 KGLQKIVVDHRIDWLIHFSALLSAVGEQNVPLAVRVNIEGVHNVIE-LAKQYKLR-IFVPSTIGA 163
            ...:|.|..  .|:::|.::....|.::.   .:...:||..||:: :|:...:| :.:.|:..|
 Worm    68 TCWKKAVAG--CDYVLHVASPFPIVSDER---CITTAVEGTMNVLKAIAEDGNVRKLVLTSSCAA 127

  Fly   164 ----------FGPDSPRNPTPNVTIQRPRTIYGVSKVHAELIGEYYYHKFGLDFRCLRFPGVISS 218
                      |..||..|...::.     ..|..||..||.....:..:...|   .:||..:.:
 Worm   128 VNEGYTQDRVFDEDSWSNLESDMV-----DCYIKSKTLAEKAAWDFIERLPED---KKFPMTVIN 184

  Fly   219 DP----PGGGTTDYAVAVFHEALRNGKYTCYLRPDTRLPMMYIEDCLRALLEFMRAPNEQLKR-R 278
            ..    |...|...|.........||:...  .|...:|::.:.|...|..|.||.|....:| .
 Worm   185 PTLVFGPAYITEQGASITLMRKFMNGEMPA--APPLNMPIVDVRDVALAHFEAMRRPESDNERIL 247

  Fly   279 VYNVTAMSFTP-----EELFAQLGKHVP---------NLHVTYKPDSRQLIADAWPQV-FDDSDA 328
            |.||.:|.|..     .|.|...|..:|         .|:..:.|:::..:.....:| ||:|.|
 Worm   248 VTNVPSMWFIDIARILREEFKGKGYWIPRFTAPYFFVRLYALFDPETKASLPRLCQEVKFDNSKA 312

  Fly   329 RRDWHWQHKYDLSNLVDFMIKDVQDNYINV 358
            :|            |:...::|.::..|::
 Worm   313 QR------------LLGMTMRDSKEALIDM 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TdhNP_649230.1 TDH_SDR_e 47..351 CDD:187580 75/346 (22%)
F13D11.4NP_508978.3 AR_SDR_e 7..317 CDD:187538 75/340 (22%)

Return to query results.
Submit another query.