DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tdh and C32D5.12

DIOPT Version :10

Sequence 1:NP_649230.1 Gene:Tdh / 40268 FlyBaseID:FBgn0036997 Length:367 Species:Drosophila melanogaster
Sequence 2:NP_495280.1 Gene:C32D5.12 / 174053 WormBaseID:WBGene00016319 Length:357 Species:Caenorhabditis elegans


Alignment Length:353 Identity:70/353 - (19%)
Similarity:115/353 - (32%) Gaps:105/353 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 ILITGGLGQLGIECAKLLRTQYGSQNVILSDIIKPSQSVLENGPYIFADILDFKGLQKIVVDHRI 112
            :.:|||.|.:|....:.|........:.:.|....|:...........|:.|.|.|:..:  ...
 Worm     4 VAVTGGAGLVGRYVVQRLLENEQIAEIRIIDRQSTSRDESRKVKLYQIDLNDRKSLENAL--RGC 66

  Fly   113 DWLIH-----FSALLSAVGEQNVPLAVRVNIEGVHNVIELAKQYKLRIFVPSTIGAFGPDSPRNP 172
            |.:||     |....|...||| .|..|.|:....:|::......::..|  .||.     ...|
 Worm    67 DGVIHCAHSPFPIFYSKDKEQN-NLMWRDNLNACESVVDTMTNLNIKTLV--NIGC-----AYCP 123

  Fly   173 TPN---------VTIQRPRTI----YGVSKVHAELIGEYYYHKF-------GLDFRCLRFPG--- 214
            .||         |.:..||..    ||.|:..    ||.|..|.       |:..|.....|   
 Worm   124 IPNEDNYGLAQDVFLDYPRNYMLDEYGESRTR----GEMYARKAAKKGSFNGIFLRPTFVYGLGK 184

  Fly   215 ----------VISSDPP--------------GGGTTDYAVAVFHEALRNGKYTCYLRPDTRLPMM 255
                      :::|..|              .|.....|...|...:.|.|     |.:..:...
 Worm   185 SKKIDTIKELILNSALPFVTGERRGMHQFIYAGNLAAIAEKSFFGLIYNSK-----RLNGEIVFC 244

  Fly   256 YIEDCLRALLEFMRA----PNEQLKRRVYNVTAMSFTPEELFA---------QLGKHVP-NL--H 304
            ..|:|..::.:|..:    ||      .....|:|:.|.  ||         .||..:| |:  |
 Worm   245 MDENCAHSIRDFFESRFLNPN------YCQEVAVSYWPS--FATSYLNYWKNMLGFKIPENILNH 301

  Fly   305 VTYK---------PDSR-QLIADAWPQV 322
            |.::         |:.: :|:.::.|::
 Worm   302 VAFRLFFEKTVGFPNKKLRLLLNSKPEI 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TdhNP_649230.1 TDH_SDR_e 47..351 CDD:187580 70/353 (20%)
C32D5.12NP_495280.1 MupV_like_SDR_e 4..326 CDD:187573 69/348 (20%)

Return to query results.
Submit another query.