DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5955 and sdr42e2

DIOPT Version :9

Sequence 1:NP_649230.1 Gene:CG5955 / 40268 FlyBaseID:FBgn0036997 Length:367 Species:Drosophila melanogaster
Sequence 2:XP_003198236.1 Gene:sdr42e2 / 100535848 ZFINID:ZDB-GENE-101203-3 Length:444 Species:Danio rerio


Alignment Length:395 Identity:78/395 - (19%)
Similarity:131/395 - (33%) Gaps:132/395 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 KILITGGLGQLGIECAKLLRTQYGSQNVILSDIIKPSQSVLENGPYIFADILDFKGLQKIVVDHR 111
            ::|:|||.|..|....:.|..|..:  |:|.|:.:|...:.:...:...||.|:..|.||...  
Zfish    71 RVLVTGGAGYFGYRLGRALARQGAA--VVLLDLHQPPWDIPDGAVFQQIDIRDYDTLYKISAG-- 131

  Fly   112 IDWLIHFSALLSAVGEQNVPLAVR-VNIEGVHNVIELAKQYKL-RIFVPSTIG-AFG----PDSP 169
            :|.:.|.::...:..||.....:. ||:.|.:|||.:..:..: |:...||:. ||.    .|..
Zfish   132 VDVIFHTASYGMSGPEQLRKKQIESVNVGGTNNVINVCAERGISRLIYTSTVNVAFAGRPIEDGD 196

  Fly   170 RNPTPNVTIQRPRTIYGVSKVHAELIGEYYYHKFGLDFRCLRFPGVISSD---PPGGGTTDYAVA 231
            .:..|.|.:......|..:|..||.:                   |::::   ..|||..     
Zfish   197 EDSVPCVPLDMHIDHYSRTKAIAERM-------------------VLAANRRSTKGGGLL----- 237

  Fly   232 VFHEALRNGKYTCYLRPD----------TRLPMMYIEDCLRALLEF-MRAPNEQLK-------RR 278
                      :||.|||.          ....|:.:|   |....| ...||.::.       ..
Zfish   238 ----------HTCVLRPSGIYGPEERRHLHRVMVNVE---RRFFSFCFGDPNAKMNWVHVDNLVT 289

  Fly   279 VYNVTAMSFTPEELFAQLGK------------------------------HVP------------ 301
            .:.:.|.:.|.|:.|...|:                              |:|            
Zfish   290 AHVLAAQALTAEKAFVASGQAYFINDGESVNVFEWLTPLFERLGYGRPLIHLPVSLVYSAAILME 354

  Fly   302 NLHVTYKP-----------DSRQLIADAWPQVFDDSDARRDWHWQHKYDLSNLVDFMIKDVQDNY 355
            .|||..:|           :.|.:   |....|....|:||..:..:       .|.:||..|.|
Zfish   355 RLHVALRPIVEIPLLLTRNEVRNI---AVSHTFKIEKAQRDLGFSPQ-------RFSLKDSVDQY 409

  Fly   356 INVQP 360
            :..:|
Zfish   410 LQSRP 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5955NP_649230.1 WcaG 47..355 CDD:223528 76/388 (20%)
TDH_SDR_e 47..351 CDD:187580 74/384 (19%)
sdr42e2XP_003198236.1 SDR 72..409 CDD:330230 76/387 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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