DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mag and Lipo1

DIOPT Version :10

Sequence 1:NP_649229.1 Gene:mag / 40267 FlyBaseID:FBgn0036996 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001309994.1 Gene:Lipo1 / 329055 MGIID:3647308 Length:399 Species:Mus musculus


Alignment Length:404 Identity:143/404 - (35%)
Similarity:214/404 - (52%) Gaps:28/404 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNPIFCALLFSLVAGLVLAEKSDYCLSEIVKSDERIRSHGYPTETHEVTTQDGYVLTLFRIPYSH 65
            :..|||.:      |.....:|:..:|:|:|..|      ||:|.:||.|.|||:|.:.|||:..
Mouse    14 LGKIFCLI------GPNKNPESNMNVSQIIKHWE------YPSEEYEVVTDDGYILPINRIPHGK 66

  Fly    66 KLKNQNEKRPPILLQHGLFSNSDCWLSSGPDNSLAYLLADAGYDVWLGNARGNIYSRNNIIISLN 130
            ...|.:..:..:....||||.:..|:|:.||||||::||||||||||||.||:.:::.::.::.:
Mouse    67 NNANSSAPKMVVFCLPGLFSTAGVWVSNPPDNSLAFILADAGYDVWLGNNRGSTWAKKHVTLNPD 131

  Fly   131 SHKFWHFDWHEIGTIDIPAMIDYILADTGFDQIHYAGHSQGTTVYLVMLSERPEYNALIKSGHLL 195
            |.:||.|.:.|:...|:||:|::||..||..||:||||||||.:.|...:...|....||...|:
Mouse   132 SKEFWAFSYDEMIKYDLPAIINFILEKTGQKQIYYAGHSQGTLIALGAFATNQELAEKIKLSILI 196

  Fly   196 APCAFFEHGTSFIFNALG--PLVGTPGGIWNQLLVDTELIPNNNLVNRLVDNSCHLSNTICNNAF 258
            ||.    |...:: ...|  |...||.. :..:..:.|..| ..:.:||..:.|.:.......|.
Mouse   197 API----HTVKYV-KGSGRLPAYFTPTA-FKIVFGEKEFFP-TKVFSRLSQHVCDIKLVDAGCAT 254

  Fly   259 IMFANGGY--VNANASSMSVLIETHPAGSSSNQ-GIHYLQLWKSLKFRQYDWGTKK-NNELYGQD 319
            ::.:..||  ...|.|.:.|.| ||....||.| .|||.|..:|..|:.||||:.. |.:.|.|.
Mouse   255 VLGSLTGYSPEQLNTSRVDVYI-THSLAESSVQILIHYGQAIRSGVFQAYDWGSPSLNMQHYNQT 318

  Fly   320 LPPDYDLSKIVAPTHLYSSTNDALCGPEDVNTLVENFPHLTEDYRVPVQSFNHLDFIIAKNMKEL 384
            .||.|::..:..||.::|...|.|..||||..||....:||  |...:..|:|||||...|.:|.
Mouse   319 TPPVYNVEDMKVPTAMFSGLKDFLSNPEDVANLVPKISNLT--YHKIISDFSHLDFITGLNAREE 381

  Fly   385 VNDPIIERINSYEG 398
            |::.|:..:..|:|
Mouse   382 VSEEILTILRKYDG 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
magNP_649229.1 PLN02872 36..390 CDD:215470 131/359 (36%)
Lipo1NP_001309994.1 PLN02872 34..391 CDD:215470 136/372 (37%)

Return to query results.
Submit another query.