DRSC/TRiP Functional Genomics Resources

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Protein Alignment mag and lipl-3

DIOPT Version :10

Sequence 1:NP_649229.1 Gene:mag / 40267 FlyBaseID:FBgn0036996 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_503233.1 Gene:lipl-3 / 178572 WormBaseID:WBGene00020016 Length:404 Species:Caenorhabditis elegans


Alignment Length:234 Identity:42/234 - (17%)
Similarity:92/234 - (39%) Gaps:63/234 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 KVPRNPDFSLNVDRIAEVVELEKPKCIFLTSPNNPDGSIISEDDLLKI--------LEM----PI 242
            |.....|:||.:..:.:.:.::|.:...|.         :..|:.||:        ||:    .:
 Worm  2384 KKAEQSDYSLKIQDLQKQLTMDKEEAEKLQ---------VDRDNFLKLALEGYKRCLEIGDKYDV 2439

  Fly   243 LVVLDEAYIEFS---------GVESRMKWVKKYENLIVLRTFSKRAGLAGLRVGYGAFPLSIIEY 298
            .||..:..:.||         .:.|.:|.|:.|:.:.::...:.|.|.:....|..:|..:::..
 Worm  2440 RVVFRQVSMWFSLASQKNVIDNMLSTIKEVQSYKFIPLVYQIASRLGSSKDESGSNSFQSALVSL 2504

  Fly   299 LWR--AKQPYNVSVAGEVAALAALSNGKYLEDVRDALVRERERLFGLLKEVPFLNPYPSYSNFIL 361
            :.:  ...||:.     :..|.||:||..::|      .:|.|                  |..:
 Worm  2505 IRKMAIDHPYHT-----ILQLLALANGDRIKD------NQRSR------------------NSFV 2540

  Fly   362 CEVTSGMDAKKLKEDLAKM-GVMVRHYNSQELKGYVRVS 399
            .::...:.|:.|.:|::.. |.|:|.. .|.:..|::::
 Worm  2541 VDMDKKLAAEHLLQDVSHYHGPMIRQM-KQLVDIYIKLA 2578

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
magNP_649229.1 PLN02872 36..390 CDD:215470 40/223 (18%)
lipl-3NP_503233.1 PLN02872 10..390 CDD:215470
Blue background indicates that the domain is not in the aligned region.

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