DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and BRL1

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_175957.1 Gene:BRL1 / 842010 AraportID:AT1G55610 Length:1166 Species:Arabidopsis thaliana


Alignment Length:1450 Identity:299/1450 - (20%)
Similarity:464/1450 - (32%) Gaps:511/1450 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 DGLISLKNLDLSHNGL-NWIHLRALSRLPNLVSLKLSHNQISDVGMVGRIVKDLE----HLKKLR 264
            ||.|  ..|||.::|| ..::|..|:.||||.:|.|..|..|..|       |..    :|:.|.
plant    76 DGRI--VGLDLRNSGLTGTLNLVNLTALPNLQNLYLQGNYFSSGG-------DSSGSDCYLQVLD 131

  Fly   265 LDNNLITVIEDGSFVD-----LPNLSELHLNDNRITELQYGAFLRTPQLKTIYLQNNLIRRIHPE 324
            |.:|.|:   |.|.||     ..||..:::::|::......|......|.|:.|..|::....||
plant   132 LSSNSIS---DYSMVDYVFSKCSNLVSVNISNNKLVGKLGFAPSSLQSLTTVDLSYNILSDKIPE 193

  Fly   325 SLLQASGSGVEAVHMYNNEIGHVEALRALLDALPRLRYLDMSGNLL----SELPYGALRGHGTLE 385
            |.:.                          |....|:|||::.|.|    |:|.:|..   |.|.
plant   194 SFIS--------------------------DFPASLKYLDLTHNNLSGDFSDLSFGIC---GNLT 229

  Fly   386 QLHLNHNHLRLIERDAL-MAMP---ALRELRMRNNSLSSDLPL-PFW-NLPGLKGLDLAQNQFA- 443
            ...|:.|:|   ..|.. :.:|   .|..|.:..|:|:..:|. .:| :...||.|.||.|:.: 
plant   230 FFSLSQNNL---SGDKFPITLPNCKFLETLNISRNNLAGKIPNGEYWGSFQNLKQLSLAHNRLSG 291

  Fly   444 RVDSQLLAGLPSLRRLDLSENGLIELAPNSFRHNPLLETLNISSNELTKIHSSTLIHLERLFEVD 508
            .:..:|.....:|..||||.|......|:.|.....|:.||:.:|.|:....:|::         
plant   292 EIPPELSLLCKTLVILDLSGNTFSGELPSQFTACVWLQNLNLGNNYLSGDFLNTVV--------- 347

  Fly   509 ASYNQLKSVIAGLPRI-VERISLKGNQITSLPAAASKDLQLPNLRMLDLSQNRIEQLPRHGF--- 569
                   |.|.|:..: |...::.|:...||...:       |||:||||.|........||   
plant   348 -------SKITGITYLYVAYNNISGSVPISLTNCS-------NLRVLDLSSNGFTGNVPSGFCSL 398

  Fly   570 QGAMELRVLSLAQNELRQLKDTSFIGIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLE 634
            |.:..|..:.:|.|.|...........:.|:.:.|..|:|.....:.:..|..|.:|.:.:|.|.
plant   399 QSSPVLEKILIANNYLSGTVPMELGKCKSLKTIDLSFNELTGPIPKEIWMLPNLSDLVMWANNLT 463

  Fly   635 -AITDNFFSNNSRLEQLDLSRNLIRSISPTAFDTQRSLEYLDLSGNALL-DISVGLGNLNNLRDI 697
             .|.:........||.|.|:.||:....|.:.....::.::.||.|.|. .|..|:|||:.|..:
plant   464 GTIPEGVCVKGGNLETLILNNNLLTGSIPESISRCTNMIWISLSSNRLTGKIPSGIGNLSKLAIL 528

  Fly   698 DLSYNQISRIQSDVIGGWRNVVEIRLSNNLIVELQQGTFRNLPKLQYLDLSSNEIRN-------- 754
            .|..|.                   ||.|  |..|.|   |...|.:|||:||.:..        
plant   529 QLGNNS-------------------LSGN--VPRQLG---NCKSLIWLDLNSNNLTGDLPGELAS 569

  Fly   755 ----VEPGALKGLDELQEFVLADNK----------LVE---LKDHVFEELP-------------- 788
                |.||::.|    ::|....|:          |||   ::....|.||              
plant   570 QAGLVMPGSVSG----KQFAFVRNEGGTDCRGAGGLVEFEGIRAERLERLPMVHSCPATRIYSGM 630

  Fly   789 ---------SLLASHFQYNKLRYISPESFHNANSLVFLNLSNNHFRNMENIGLRSMRNLEVLDLS 844
                     |::.....||.:....|..:.|...|..|||.:|............::.:.|||||
plant   631 TMYTFSANGSMIYFDISYNAVSGFIPPGYGNMGYLQVLNLGHNRITGTIPDSFGGLKAIGVLDLS 695

  Fly   845 TNGVKLVSTMPLKALNWLVELKMDNNQICRIQGSPFETMPRLRVLSMRNNQLRSIKERTFRNVRG 909
            .|.::......|.:|::|.:|.:.||                                   |:.|
plant   696 HNNLQGYLPGSLGSLSFLSDLDVSNN-----------------------------------NLTG 725

  Fly   910 NIAILDVDGNPIDCNCEMQWLSVWLQETNFPYPGPKCQDGRLLRSARMERSLCVGADIYGNERTD 974
            .|..    |.               |.|.||          :.|.|. ...||            
plant   726 PIPF----GG---------------QLTTFP----------VSRYAN-NSGLC------------ 748

  Fly   975 GNQLPLLNEHGDVFQRDLPDDFNDECEAGEGTRLPGDRPLVGESEYFYDQYVDATEAPDTTHSAI 1039
              .:||                               ||              ...||       
plant   749 --GVPL-------------------------------RP--------------CGSAP------- 759

  Fly  1040 STSQRPKPTPTINSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRFFGFGDRGRKQ 1104
               :||     |.|.|......:.|...       :|..|:|..:.:..::|.|           
plant   760 ---RRP-----ITSRIHAKKQTVATAVI-------AGIAFSFMCFVMLVMALYR----------- 798

  Fly  1105 RTDSNDDMPATHRMAHISLPSGRGKTRMYQPNSAEFEKYLKDQQKQEKLNIARNRYVDTDSTTSS 1169
                                               ..|..|.:||:||       |:::..|:.|
plant   799 -----------------------------------VRKVQKKEQKREK-------YIESLPTSGS 821

  Fly  1170 MEDALSNESGSAATTVGVFRTTFREPSSIE----RGGFRPIVPAHVGGFMPVHDPQQRRGLV--- 1227
            ....||:.....:..|..|....|:.:...    ..||........|||..|:..|.|.|.|   
plant   822 CSWKLSSVPEPLSINVATFEKPLRKLTFAHLLEATNGFSAETMVGSGGFGEVYKAQLRDGSVVAI 886

  Fly  1228 -EVVNITGN-------PSEIVQGIGQRKFIPISTQARPKPTKSSGE------------SSETATY 1272
             :::.|||.       ..|.:..|..|..:|:....:      .||            |.||..:
plant   887 KKLIRITGQGDREFMAEMETIGKIKHRNLVPLLGYCK------VGEERLLVYEYMKWGSLETVLH 945

  Fly  1273 EVTETTPDITTTTPLMQRIATSTTKASTTTTRSTTTTSTTQVTPAENNASSSTELDSQYDDEDLE 1337
            |.:.....|.......::||....:.......|.......:     :..||:..|     |||.|
plant   946 EKSSKKGGIYLNWAARKKIAIGAARGLAFLHHSCIPHIIHR-----DMKSSNVLL-----DEDFE 1000

  Fly  1338 AQSVTLLRPPPLVQTTTAETILLIPPAEEHVAQIKSRSWVTTTTPQSPSDNQVTLAGPTSTVPPP 1402
            |            :.:......|:...:.|:                   :..||||....||| 
plant  1001 A------------RVSDFGMARLVSALDTHL-------------------SVSTLAGTPGYVPP- 1033

  Fly  1403 PPASPPLRGGGRSTITKVYTPYQQQVAQPTAEEYQ--RTTPSGD--NEGVASEHQLTANAQKRTE 1463
                                           |.||  |.|..||  :.||..             
plant  1034 -------------------------------EYYQSFRCTAKGDVYSYGVIL------------- 1054

  Fly  1464 LELLQVDR-VDRKD-GMD-----WYYESFKKKRDFNGGAAV-------RKTAHKEVF-YDGVAAS 1513
            ||||...: :|..: |.|     |..:.:::||    ||.:       .|:...|:| |..:|:.
plant  1055 LELLSGKKPIDPGEFGEDNNLVGWAKQLYREKR----GAEILDPELVTDKSGDVELFHYLKIASQ 1115

  Fly  1514 SSWNRLHKEILFISLLLLWR 1533
            ...:|..|....|.|:.:::
plant  1116 CLDDRPFKRPTMIQLMAMFK 1135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380 0/19 (0%)
PCC 891..>936 CDD:188093 4/44 (9%)
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914 88/346 (25%)
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
leucine-rich repeat 185..209 CDD:275380 2/3 (67%)
leucine-rich repeat 210..233 CDD:275380 8/23 (35%)
leucine-rich repeat 234..259 CDD:275380 7/28 (25%)
leucine-rich repeat 260..283 CDD:275380 9/27 (33%)
leucine-rich repeat 284..307 CDD:275380 3/22 (14%)
leucine-rich repeat 308..359 CDD:275380 8/50 (16%)
leucine-rich repeat 334..348 CDD:275378 0/13 (0%)
PLN00113 359..>824 CDD:215061 129/529 (24%)
leucine-rich repeat 360..383 CDD:275380 9/26 (35%)
leucine-rich repeat 384..407 CDD:275380 6/26 (23%)
leucine-rich repeat 408..431 CDD:275380 6/24 (25%)
leucine-rich repeat 432..455 CDD:275380 7/23 (30%)
leucine-rich repeat 456..476 CDD:275380 8/19 (42%)
leucine-rich repeat 480..501 CDD:275380 6/20 (30%)
leucine-rich repeat 505..517 CDD:275378 0/11 (0%)
leucine-rich repeat 525..550 CDD:275380 4/24 (17%)
leucine-rich repeat 551..574 CDD:275380 10/25 (40%)
leucine-rich repeat 575..598 CDD:275380 4/22 (18%)
leucine-rich repeat 599..622 CDD:275380 5/22 (23%)
leucine-rich repeat 623..646 CDD:275380 5/23 (22%)
leucine-rich repeat 647..670 CDD:275380 7/22 (32%)
leucine-rich repeat 671..693 CDD:275380 9/22 (41%)
leucine-rich repeat 694..717 CDD:275380 3/22 (14%)
leucine-rich repeat 718..741 CDD:275380 7/22 (32%)
leucine-rich repeat 742..763 CDD:275380 9/32 (28%)
leucine-rich repeat 766..789 CDD:275380 8/58 (14%)
leucine-rich repeat 790..813 CDD:275380 4/22 (18%)
leucine-rich repeat 814..835 CDD:275380 5/20 (25%)
leucine-rich repeat 838..861 CDD:275380 8/22 (36%)
leucine-rich repeat 862..885 CDD:275380 4/22 (18%)
BRL1NP_175957.1 PLN00113 33..1125 CDD:215061 297/1438 (21%)
leucine-rich repeat 104..125 CDD:275380 7/27 (26%)
leucine-rich repeat 127..152 CDD:275380 9/27 (33%)
leucine-rich repeat 153..176 CDD:275380 3/22 (14%)
leucine-rich repeat 177..202 CDD:275380 8/50 (16%)
leucine-rich repeat 203..227 CDD:275380 9/26 (35%)
leucine-rich repeat 228..278 CDD:275380 12/52 (23%)
leucine-rich repeat 279..303 CDD:275380 7/23 (30%)
leucine-rich repeat 304..330 CDD:275380 9/25 (36%)
leucine-rich repeat 331..376 CDD:275380 12/67 (18%)
leucine-rich repeat 332..352 CDD:275380 6/35 (17%)
leucine-rich repeat 377..400 CDD:275380 9/22 (41%)
leucine-rich repeat 404..427 CDD:275380 4/22 (18%)
leucine-rich repeat 428..451 CDD:275380 5/22 (23%)
leucine-rich repeat 452..476 CDD:275380 5/23 (22%)
leucine-rich repeat 477..500 CDD:275380 7/22 (32%)
leucine-rich repeat 501..524 CDD:275380 9/22 (41%)
leucine-rich repeat 525..546 CDD:275380 9/44 (20%)
leucine-rich repeat 549..664 CDD:275380 23/118 (19%)
Island 572..636 CDD:466303 12/67 (18%)
leucine-rich repeat 612..660 CDD:275380 7/47 (15%)
leucine-rich repeat 665..688 CDD:275380 5/22 (23%)
leucine-rich repeat 689..710 CDD:275380 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.

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