DRSC/TRiP Functional Genomics Resources

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Protein Alignment atk and LRR XI-23

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_172468.3 Gene:LRR XI-23 / 837531 AraportID:AT1G09970 Length:977 Species:Arabidopsis thaliana


Alignment Length:646 Identity:148/646 - (22%)
Similarity:257/646 - (39%) Gaps:113/646 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 RLEAGL----FDGLI-----SLKNLDLSHNGLNW-IHLRALSRLPNLVSLKLSHNQISDVGMVGR 252
            :|.:|:    |.|:.     ::..:|||..||:. ....::..:.:|..|.|..|.:|  |::..
plant    53 KLNSGIGPCSFIGVTCNSRGNVTEIDLSRRGLSGNFPFDSVCEIQSLEKLSLGFNSLS--GIIPS 115

  Fly   253 IVKDLEHLKKLRLDNNLITVIEDGSFVDLPNLSELHLNDNRITELQYGAFLRTPQLKTIYLQNNL 317
            .:|:...||.|.|.|||.:    |:|   |..|.|:                  ||:.:||.|:.
plant   116 DLKNCTSLKYLDLGNNLFS----GAF---PEFSSLN------------------QLQFLYLNNSA 155

  Fly   318 IRRIHPESLLQASGSGVEAVHMYNNEIGHVEALRALLDALPRLRYLDMSG-NLLSELPYGALRGH 381
            ...:.|...|: :.:.:..:.:.:|...........:.:|.:|.:|.:|. ::..::| .|:...
plant   156 FSGVFPWKSLR-NATSLVVLSLGDNPFDATADFPVEVVSLKKLSWLYLSNCSIAGKIP-PAIGDL 218

  Fly   382 GTLEQLHLNHNHLRLIERDALMAMPALRELRMRNNSLSSDLPLPFWNLPGLKGLDLAQNQFARVD 446
            ..|..|.::.:.|.......:..:..|.:|.:.||||:..||..|.||..|..||.:.|      
plant   219 TELRNLEISDSGLTGEIPSEISKLTNLWQLELYNNSLTGKLPTGFGNLKNLTYLDASTN------ 277

  Fly   447 SQLLAGLPSLRRLDLSENGLIELAPNSFRHNPLLETLNISSNELTKIHSSTLIHLERLFEVDASY 511
              ||.|       ||||          .|....|.:|.:..||.:.             |:...:
plant   278 --LLQG-------DLSE----------LRSLTNLVSLQMFENEFSG-------------EIPLEF 310

  Fly   512 NQLKSVIAGLPRIVERISLKGNQIT-SLPAAASKDLQLPNLRMLDLSQNRI-----EQLPRHGFQ 570
            .:.|.::        .:||..|::| |||....   .|.:...:|.|:|.:     ..:.::|  
plant   311 GEFKDLV--------NLSLYTNKLTGSLPQGLG---SLADFDFIDASENLLTGPIPPDMCKNG-- 362

  Fly   571 GAMELRVLSLAQNELRQLKDTSFIGIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLEA 635
               :::.|.|.||.|......|:.....|:...:.||.|.......|..|.:|..::::.|..|.
plant   363 ---KMKALLLLQNNLTGSIPESYANCLTLQRFRVSENNLNGTVPAGLWGLPKLEIIDIEMNNFEG 424

  Fly   636 ITDNFFSNNSRLEQLDLSRNLIRSISPTAFDTQRSLEYLDLSGNALL-DISVGLGNLNNLRDIDL 699
            .......|...|..|.|..|.:....|.......||..::|:.|... .|...:|.|..|..:.:
plant   425 PITADIKNGKMLGALYLGFNKLSDELPEEIGDTESLTKVELNNNRFTGKIPSSIGKLKGLSSLKM 489

  Fly   700 SYNQISRIQSDVIGGWRNVVEIRLSNNLIVELQQGTFRNLPKLQYLDLSSNEIRNVEPGALKGLD 764
            ..|..|....|.||....:.::.::.|.|......|..:||.|..|:||.|::....|.:|..| 
plant   490 QSNGFSGEIPDSIGSCSMLSDVNMAQNSISGEIPHTLGSLPTLNALNLSDNKLSGRIPESLSSL- 553

  Fly   765 ELQEFVLADNKL-----VELKDH--VFEELPSLLASHFQ-YNKLRYISPESFHNANSLVFL 817
            .|....|::|:|     :.|..:  .|...|.|.::..: :|  |.|:|...| .::.||:
plant   554 RLSLLDLSNNRLSGRIPLSLSSYNGSFNGNPGLCSTTIKSFN--RCINPSRSH-GDTRVFV 611

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380
PCC 891..>936 CDD:188093
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914 74/342 (22%)
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
leucine-rich repeat 185..209 CDD:275380 4/19 (21%)
leucine-rich repeat 210..233 CDD:275380 5/23 (22%)
leucine-rich repeat 234..259 CDD:275380 7/24 (29%)
leucine-rich repeat 260..283 CDD:275380 9/22 (41%)
leucine-rich repeat 284..307 CDD:275380 2/22 (9%)
leucine-rich repeat 308..359 CDD:275380 8/50 (16%)
leucine-rich repeat 334..348 CDD:275378 1/13 (8%)
PLN00113 359..>824 CDD:215061 111/475 (23%)
leucine-rich repeat 360..383 CDD:275380 5/23 (22%)
leucine-rich repeat 384..407 CDD:275380 3/22 (14%)
leucine-rich repeat 408..431 CDD:275380 11/22 (50%)
leucine-rich repeat 432..455 CDD:275380 7/22 (32%)
leucine-rich repeat 456..476 CDD:275380 4/19 (21%)
leucine-rich repeat 480..501 CDD:275380 4/20 (20%)
leucine-rich repeat 505..517 CDD:275378 2/11 (18%)
leucine-rich repeat 525..550 CDD:275380 8/25 (32%)
leucine-rich repeat 551..574 CDD:275380 4/27 (15%)
leucine-rich repeat 575..598 CDD:275380 6/22 (27%)
leucine-rich repeat 599..622 CDD:275380 6/22 (27%)
leucine-rich repeat 623..646 CDD:275380 4/22 (18%)
leucine-rich repeat 647..670 CDD:275380 5/22 (23%)
leucine-rich repeat 671..693 CDD:275380 6/22 (27%)
leucine-rich repeat 694..717 CDD:275380 6/22 (27%)
leucine-rich repeat 718..741 CDD:275380 4/22 (18%)
leucine-rich repeat 742..763 CDD:275380 7/20 (35%)
leucine-rich repeat 766..789 CDD:275380 6/29 (21%)
leucine-rich repeat 790..813 CDD:275380 6/23 (26%)
leucine-rich repeat 814..835 CDD:275380 2/4 (50%)
leucine-rich repeat 838..861 CDD:275380
leucine-rich repeat 862..885 CDD:275380
LRR XI-23NP_172468.3 PLN00113 14..955 CDD:215061 148/646 (23%)
leucine-rich repeat 74..98 CDD:275380 5/23 (22%)
leucine-rich repeat 99..122 CDD:275380 7/24 (29%)
leucine-rich repeat 123..145 CDD:275380 12/46 (26%)
leucine-rich repeat 146..170 CDD:275380 6/24 (25%)
leucine-rich repeat 171..196 CDD:275380 2/24 (8%)
leucine-rich repeat 197..220 CDD:275380 5/23 (22%)
leucine-rich repeat 221..244 CDD:275380 3/22 (14%)
leucine-rich repeat 245..268 CDD:275380 11/22 (50%)
leucine-rich repeat 269..291 CDD:275380 12/46 (26%)
leucine-rich repeat 292..310 CDD:275380 5/30 (17%)
leucine-rich repeat 316..340 CDD:275380 8/34 (24%)
leucine-rich repeat 341..363 CDD:275380 4/26 (15%)
leucine-rich repeat 364..387 CDD:275380 6/22 (27%)
leucine-rich repeat 388..411 CDD:275380 6/22 (27%)
leucine-rich repeat 412..435 CDD:275380 4/22 (18%)
leucine-rich repeat 436..459 CDD:275380 5/22 (23%)
leucine-rich repeat 460..483 CDD:275380 6/22 (27%)
leucine-rich repeat 484..507 CDD:275380 6/22 (27%)
leucine-rich repeat 508..531 CDD:275380 4/22 (18%)
Blue background indicates that the domain is not in the aligned region.

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