DRSC/TRiP Functional Genomics Resources

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Protein Alignment atk and AT5G49760

DIOPT Version :9

Sequence 1:NP_001262113.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_199787.2 Gene:AT5G49760 / 835039 AraportID:AT5G49760 Length:953 Species:Arabidopsis thaliana


Alignment Length:687 Identity:167/687 - (24%)
Similarity:242/687 - (35%) Gaps:228/687 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   670 SLEYLDLSGNALLDISVGLGNLNNLRDIDLSYNQISRIQSDV------IGGWRNVVEIRLSNNLI 728
            ||..|||.|....|||.    |:.||.:|||||  .::...:      :|..||::.:..|.:..
plant    71 SLGNLDLEGKLPADISF----LSELRILDLSYN--PKLSGPLPPNIGNLGKLRNLILVGCSFSGQ 129

  Fly   729 VELQQGTFRNLPKLQYLDLSSNEIRNVEPGALKGLDELQEFVLADNKLVELKDHVFEELP----- 788
            :....||   |.:|.||.|:.|:.....|.::..|.:|..|.:|||:       :..|||     
plant   130 IPESIGT---LKELIYLSLNLNKFSGTIPPSIGLLSKLYWFDIADNQ-------IEGELPVSNGT 184

  Fly   789 ------SLLAS---HFQYNKLRYISPESFHNAN-SLVFLNLSNNHFRNMENIGLRSMRNLEVLDL 843
                  .||.:   ||..|||....|:...::| ||:.:....|.|.......|..::.|.||.|
plant   185 SAPGLDMLLQTKHFHFGKNKLSGNIPKELFSSNMSLIHVLFDGNQFTGEIPETLSLVKTLTVLRL 249

  Fly   844 STNGVKLVSTMP--LKALNWLVELKMDNNQICRIQGSPFETMPRLRVLSMRNNQLRSIKERTFRN 906
            ..|  ||:..:|  |..|..|.||.:.||   |..|    |:|.|..|:                
plant   250 DRN--KLIGDIPSYLNNLTNLNELYLANN---RFTG----TLPNLTSLT---------------- 289

  Fly   907 VRGNIAILDVDGNPIDCNCEMQWLSVWLQ---------ETNFPYP-----GPKCQDGRLLRSARM 957
               ::..|||..|.:|.:....|:|....         :.|.|.|     .|:.|...|.|::.:
plant   290 ---SLYTLDVSNNTLDFSPIPSWISSLPSLSTLRMEGIQLNGPIPISFFSPPQLQTVILKRNSIV 351

  Fly   958 ERSLCVGADIYG---------NERTDGNQLPLLNEHGDVFQRDLPDDFNDEC-EAGEGTRLPGDR 1012
            | ||..|.|:..         ||.||  ..|..|:   |.|..|.:  |..| |||.|       
plant   352 E-SLDFGTDVSSQLEFVDLQYNEITD--YKPSANK---VLQVILAN--NPVCLEAGNG------- 401

  Fly  1013 PLVGESEYFYDQYVDATEAPDTTHSAISTSQRP-----KPTPTINSNIDLNNTILHTKYFNRKP- 1071
                      ..|..|.: .:|:.|.:.|:..|     :.:||.........|:    || |.| 
plant   402 ----------PSYCSAIQ-HNTSFSTLPTNCSPCEPGMEASPTCRCAYPFMGTL----YF-RSPS 450

  Fly  1072 -------------QPGSGSPFTFFGYPLPSVSLGRFFGFGDRGRKQRTDSNDDMPATHRMAHISL 1123
                         |......|..|.||:.||        |.|..::.       |..|::. |.|
plant   451 FSGLFNSTNFSILQKAIADFFKKFNYPVDSV--------GVRNIREN-------PTDHQLL-IDL 499

  Fly  1124 ---PSGR---GKTRM-----------YQPN--------SAEFEKYLKDQQKQEK----------- 1152
               |.||   .:|.|           |:|.        .|:..|...|.:...|           
plant   500 LVFPLGRESFNQTGMSLVGFAFSNQTYKPPPIFGPYIFKADLYKQFSDVEVSSKSSNKSILIGAV 564

  Fly  1153 ---------LNIA-----------------RNRYVDTDSTTSSMEDALSNESGSAATTVGVFRTT 1191
                     |.||                 .|.:...|::.||: ||.......|.|...:.:.|
plant   565 VGVVVLLLLLTIAGIYALRQKKRAERATGQNNPFAKWDTSKSSI-DAPQLMGAKAFTFEELKKCT 628

  Fly  1192 --FREPSSIERGG----FRPIVPAHVGGFMPVHDPQQ 1222
              |.|.:.:..||    :|.|:|.  |..:.:...||
plant   629 DNFSEANDVGGGGYGKVYRGILPN--GQLIAIKRAQQ 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_001262113.1 leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
LRR_8 183..244 CDD:290566
leucine-rich repeat 185..209 CDD:275380
LRR_4 209..247 CDD:289563
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..259 CDD:275380
LRR_RI 250..492 CDD:238064
LRR_8 259..318 CDD:290566
leucine-rich repeat 260..283 CDD:275380
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..359 CDD:275380
leucine-rich repeat 334..348 CDD:275378
LRR_8 358..418 CDD:290566
leucine-rich repeat 360..383 CDD:275380
leucine-rich repeat 384..407 CDD:275380
LRR_8 406..466 CDD:290566
leucine-rich repeat 408..431 CDD:275380
leucine-rich repeat 432..455 CDD:275380
LRR_RI 447..705 CDD:238064 17/34 (50%)
LRR_8 454..514 CDD:290566
leucine-rich repeat 456..476 CDD:275380
leucine-rich repeat 480..501 CDD:275380
leucine-rich repeat 505..517 CDD:275378
leucine-rich repeat 525..550 CDD:275380
LRR_8 549..609 CDD:290566
leucine-rich repeat 551..574 CDD:275380
leucine-rich repeat 575..598 CDD:275380
leucine-rich repeat 599..622 CDD:275380
LRR_8 622..681 CDD:290566 6/10 (60%)
leucine-rich repeat 623..646 CDD:275380
LRR_RI 647..896 CDD:238064 74/248 (30%)
leucine-rich repeat 647..670 CDD:275380 167/687 (24%)
leucine-rich repeat 671..693 CDD:275380 9/21 (43%)
leucine-rich repeat 694..717 CDD:275380 8/28 (29%)
LRR_8 716..776 CDD:290566 18/59 (31%)
leucine-rich repeat 718..741 CDD:275380 4/22 (18%)
leucine-rich repeat 742..763 CDD:275380 6/20 (30%)
LRR_8 765..824 CDD:290566 20/73 (27%)
leucine-rich repeat 766..789 CDD:275380 8/33 (24%)
leucine-rich repeat 790..813 CDD:275380 9/26 (35%)
leucine-rich repeat 814..835 CDD:275380 4/20 (20%)
leucine-rich repeat 838..861 CDD:275380 10/24 (42%)
LRR_8 862..921 CDD:290566 15/58 (26%)
leucine-rich repeat 862..885 CDD:275380 8/22 (36%)
leucine-rich repeat 886..906 CDD:275380 2/19 (11%)
TPKR_C2 919..>946 CDD:301599 8/40 (20%)
AT5G49760NP_199787.2 PLN00113 69..903 CDD:215061 167/687 (24%)
leucine-rich repeat 71..90 CDD:275380 10/22 (45%)
leucine-rich repeat 91..115 CDD:275380 7/25 (28%)
leucine-rich repeat 116..139 CDD:275380 6/25 (24%)
leucine-rich repeat 140..163 CDD:275380 7/22 (32%)
leucine-rich repeat 164..188 CDD:275380 8/30 (27%)
leucine-rich repeat 189..219 CDD:275380 9/29 (31%)
leucine-rich repeat 220..243 CDD:275380 4/22 (18%)
leucine-rich repeat 244..267 CDD:275380 10/24 (42%)
leucine-rich repeat 268..290 CDD:275380 11/47 (23%)
leucine-rich repeat 291..315 CDD:275380 7/23 (30%)
leucine-rich repeat 316..334 CDD:275380 3/17 (18%)
leucine-rich repeat 340..363 CDD:275380 8/23 (35%)
STKc_IRAK 649..904 CDD:270968 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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