DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and FLS2

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_199445.1 Gene:FLS2 / 834676 AraportID:AT5G46330 Length:1173 Species:Arabidopsis thaliana


Alignment Length:726 Identity:189/726 - (26%)
Similarity:305/726 - (42%) Gaps:125/726 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   221 NWIHLRALSRLPNLVSLKLSHNQISDVGMVGRIVKDLEHLKKLRLDNNLITVIEDGSFVDLPNLS 285
            ||..:...| ..::||:.|...|:.  |::...:.:|.:|:.|.|.:|..|.........|..|:
plant    62 NWTGITCDS-TGHVVSVSLLEKQLE--GVLSPAIANLTYLQVLDLTSNSFTGKIPAEIGKLTELN 123

  Fly   286 ELHLNDNRIT-ELQYGAFLRTPQLKTIY---LQNNLIRRIHPESLLQASGSGVEAVHMYNNEIGH 346
            :|.|..|..: .:..|.:    :||.|:   |:|||:....||.:.:.| |.|.....|||..|.
plant   124 QLILYLNYFSGSIPSGIW----ELKNIFYLDLRNNLLSGDVPEEICKTS-SLVLIGFDYNNLTGK 183

  Fly   347 V-EALRAL--------------------LDALPRLRYLDMSGN-LLSELP--YGALRGHGTLEQL 387
            : |.|..|                    :..|..|..||:||| |..::|  :|.|.   .|:.|
plant   184 IPECLGDLVHLQMFVAAGNHLTGSIPVSIGTLANLTDLDLSGNQLTGKIPRDFGNLL---NLQSL 245

  Fly   388 HLNHNHLRLIERDALMAMPA-------LRELRMRNNSLSSDLPLPFWNLPGLKGLDLAQNQFARV 445
            .|..|   |:|.|    :||       |.:|.:.:|.|:..:|....||..|:.|.:.:|:....
plant   246 VLTEN---LLEGD----IPAEIGNCSSLVQLELYDNQLTGKIPAELGNLVQLQALRIYKNKLTSS 303

  Fly   446 DSQLLAGLPSLRRLDLSENGLIELAPNSFRHNPLLETLNISSNELTKIHSSTLIHLERLFEVDAS 510
            ....|..|..|..|.||||.|:............||.|.:.||..|.....::.:|..|..:...
plant   304 IPSSLFRLTQLTHLGLSENHLVGPISEEIGFLESLEVLTLHSNNFTGEFPQSITNLRNLTVLTVG 368

  Fly   511 YNQLKSVI---AGLPRIVERISLKGNQITS-LPAAASKDLQLPNLRMLDLSQNRIE-QLPRHGFQ 570
            :|.:...:   .||...:..:|...|.:|. :|::.|   ....|::||||.|::. ::|| || 
plant   369 FNNISGELPADLGLLTNLRNLSAHDNLLTGPIPSSIS---NCTGLKLLDLSHNQMTGEIPR-GF- 428

  Fly   571 GAMELRVLSLAQN----------------ELRQLKDTSFIG--------IQRLELLHLQEN---- 607
            |.|.|..:|:.:|                |...:.|.:..|        :|:|.:|.:..|    
plant   429 GRMNLTFISIGRNHFTGEIPDDIFNCSNLETLSVADNNLTGTLKPLIGKLQKLRILQVSYNSLTG 493

  Fly   608 ----QLGEADE----------------RALLPLAELRNLNLQSNKLEA-ITDNFFSNNSRLEQLD 651
                ::|...:                |.:..|..|:.|.:.||.||. |.:..| :...|..||
plant   494 PIPREIGNLKDLNILYLHSNGFTGRIPREMSNLTLLQGLRMYSNDLEGPIPEEMF-DMKLLSVLD 557

  Fly   652 LSRNLIRSISPTAFDTQRSLEYLDLSGNALL-DISVGLGNLNNLRDIDLSYNQIS-RIQSDVIGG 714
            ||.|......|..|....||.||.|.||... .|...|.:|:.|...|:|.|.:: .|..:::..
plant   558 LSNNKFSGQIPALFSKLESLTYLSLQGNKFNGSIPASLKSLSLLNTFDISDNLLTGTIPGELLAS 622

  Fly   715 WRNV-VEIRLSNNLIVELQQGTF-RNLPKL---QYLDLSSNEIRNVEPGALKGLDELQEFVLADN 774
            .:|: :.:..||||:.    ||. :.|.||   |.:|||:|......|.:|:....:.....:.|
plant   623 LKNMQLYLNFSNNLLT----GTIPKELGKLEMVQEIDLSNNLFSGSIPRSLQACKNVFTLDFSQN 683

  Fly   775 KLV-ELKDHVFEELPSLLASHFQYNKLRYISPESFHNANSLVFLNLSNNHFRNMENIGLRSMRNL 838
            .|. .:.|.||:.:..:::.:...|......|:||.|...||.|:||:|:........|.::..|
plant   684 NLSGHIPDEVFQGMDMIISLNLSRNSFSGEIPQSFGNMTHLVSLDLSSNNLTGEIPESLANLSTL 748

  Fly   839 EVLDLSTNGVK 849
            :.|.|::|.:|
plant   749 KHLKLASNNLK 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380
PCC 891..>936 CDD:188093
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914 89/346 (26%)
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
leucine-rich repeat 185..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380 3/11 (27%)
leucine-rich repeat 234..259 CDD:275380 6/24 (25%)
leucine-rich repeat 260..283 CDD:275380 6/22 (27%)
leucine-rich repeat 284..307 CDD:275380 5/23 (22%)
leucine-rich repeat 308..359 CDD:275380 20/74 (27%)
leucine-rich repeat 334..348 CDD:275378 5/14 (36%)
PLN00113 359..>824 CDD:215061 143/536 (27%)
leucine-rich repeat 360..383 CDD:275380 10/25 (40%)
leucine-rich repeat 384..407 CDD:275380 7/22 (32%)
leucine-rich repeat 408..431 CDD:275380 7/22 (32%)
leucine-rich repeat 432..455 CDD:275380 5/22 (23%)
leucine-rich repeat 456..476 CDD:275380 7/19 (37%)
leucine-rich repeat 480..501 CDD:275380 6/20 (30%)
leucine-rich repeat 505..517 CDD:275378 1/11 (9%)
leucine-rich repeat 525..550 CDD:275380 5/25 (20%)
leucine-rich repeat 551..574 CDD:275380 11/23 (48%)
leucine-rich repeat 575..598 CDD:275380 6/46 (13%)
leucine-rich repeat 599..622 CDD:275380 6/46 (13%)
leucine-rich repeat 623..646 CDD:275380 8/23 (35%)
leucine-rich repeat 647..670 CDD:275380 8/22 (36%)
leucine-rich repeat 671..693 CDD:275380 9/22 (41%)
leucine-rich repeat 694..717 CDD:275380 5/23 (22%)
leucine-rich repeat 718..741 CDD:275380 7/24 (29%)
leucine-rich repeat 742..763 CDD:275380 8/23 (35%)
leucine-rich repeat 766..789 CDD:275380 5/23 (22%)
leucine-rich repeat 790..813 CDD:275380 5/22 (23%)
leucine-rich repeat 814..835 CDD:275380 7/20 (35%)
leucine-rich repeat 838..861 CDD:275380 5/12 (42%)
leucine-rich repeat 862..885 CDD:275380
FLS2NP_199445.1 PLN00113 8..1153 CDD:215061 189/726 (26%)
leucine-rich repeat 98..121 CDD:275380 6/22 (27%)
leucine-rich repeat 122..145 CDD:275380 6/26 (23%)
leucine-rich repeat 146..169 CDD:275380 8/23 (35%)
leucine-rich repeat 170..193 CDD:275380 8/22 (36%)
leucine-rich repeat 218..241 CDD:275380 10/25 (40%)
leucine-rich repeat 242..265 CDD:275380 9/29 (31%)
leucine-rich repeat 266..289 CDD:275380 7/22 (32%)
leucine-rich repeat 290..313 CDD:275380 5/22 (23%)
leucine-rich repeat 314..337 CDD:275380 7/22 (32%)
leucine-rich repeat 338..361 CDD:275380 7/22 (32%)
leucine-rich repeat 362..385 CDD:275380 4/22 (18%)
leucine-rich repeat 386..409 CDD:275380 5/25 (20%)
leucine-rich repeat 410..431 CDD:275380 11/22 (50%)
leucine-rich repeat 433..456 CDD:275380 3/22 (14%)
leucine-rich repeat 481..504 CDD:275380 4/22 (18%)
leucine-rich repeat 505..528 CDD:275380 2/22 (9%)
leucine-rich repeat 529..552 CDD:275380 8/23 (35%)
leucine-rich repeat 553..576 CDD:275380 8/22 (36%)
leucine-rich repeat 577..600 CDD:275380 9/22 (41%)
leucine-rich repeat 601..625 CDD:275380 5/23 (22%)
leucine-rich repeat 626..650 CDD:275380 9/27 (33%)
leucine-rich repeat 651..674 CDD:275380 7/22 (32%)
leucine-rich repeat 675..699 CDD:275380 5/23 (22%)
leucine-rich repeat 700..723 CDD:275380 5/22 (23%)
leucine-rich repeat 724..747 CDD:275380 7/22 (32%)
Blue background indicates that the domain is not in the aligned region.

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