DRSC/TRiP Functional Genomics Resources

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Protein Alignment atk and BRL3

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_187946.1 Gene:BRL3 / 820538 AraportID:AT3G13380 Length:1164 Species:Arabidopsis thaliana


Alignment Length:808 Identity:202/808 - (25%)
Similarity:315/808 - (38%) Gaps:187/808 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 DGLISLKNLDLSHNGL-NWIHLRALSRLPNLVSLKLSHNQISDVGMVGRIVKDLEHLKKLRLDNN 268
            ||.:.  .|||.:.|| ..::|..|:.|.||.||.|..|..|...........||   .|.|.:|
plant    75 DGRVI--GLDLRNGGLTGTLNLNNLTALSNLRSLYLQGNNFSSGDSSSSSGCSLE---VLDLSSN 134

  Fly   269 LITVIEDGSFVDLP-----NLSELHLNDNRIT-ELQYGAFLRTPQLKTIYLQNNLIRRIHPESLL 327
            .:|   |.|.||..     ||..::.:.|::. :|:........::.|:.|.||......||:. 
plant   135 SLT---DSSIVDYVFSTCLNLVSVNFSHNKLAGKLKSSPSASNKRITTVDLSNNRFSDEIPETF- 195

  Fly   328 QASGSGVEAVHMYNNEIGHVEALRALLDALPRLRYLDMSGNLL----SELPYGALRGHGTLEQLH 388
                                     :.|....|::||:|||.:    |.|.:|...   .|....
plant   196 -------------------------IADFPNSLKHLDLSGNNVTGDFSRLSFGLCE---NLTVFS 232

  Fly   389 LNHNHLRLIERD----ALMAMPALRELRMRNNSLSSDLP-LPFW-NLPGLKGLDLAQNQFA-RVD 446
            |:.|.   |..|    :|.....|..|.:..|||...:| ..:| |...|:.|.||.|.:: .:.
plant   233 LSQNS---ISGDRFPVSLSNCKLLETLNLSRNSLIGKIPGDDYWGNFQNLRQLSLAHNLYSGEIP 294

  Fly   447 SQLLAGLPSLRRLDLSENGLIELAPNSFRHNPLLETLNISSNELTKIHSSTLIHLERLFEVDASY 511
            .:|.....:|..||||.|.|....|.||.....|::||:.:|:|                   |.
plant   295 PELSLLCRTLEVLDLSGNSLTGQLPQSFTSCGSLQSLNLGNNKL-------------------SG 340

  Fly   512 NQLKSVIAGLPRIVERISLKGNQIT-SLPAAASKDLQLPNLRMLDLSQNRIEQLPRHGF---QGA 572
            :.|.:|::.|.||. .:.|..|.|: |:|.:.:   ...|||:||||.|........||   |.:
plant   341 DFLSTVVSKLSRIT-NLYLPFNNISGSVPISLT---NCSNLRVLDLSSNEFTGEVPSGFCSLQSS 401

  Fly   573 MELRVLSLAQNELRQLKDTSFIGIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLE-AI 636
            ..|..|.:|.|.|...........:.|:.:.|..|.|.....:.:..|.:|.:|.:.:|.|. .|
plant   402 SVLEKLLIANNYLSGTVPVELGKCKSLKTIDLSFNALTGLIPKEIWTLPKLSDLVMWANNLTGGI 466

  Fly   637 TDNFFSNNSRLEQLDLSRNLIRSISPTAFDTQRSLEYLDLSGNALL-DISVGLGNLNNLRDIDLS 700
            .::...:...||.|.|:.||:....|.:.....::.::.||.|.|. :|.||:|.|..|..:.|.
plant   467 PESICVDGGNLETLILNNNLLTGSLPESISKCTNMLWISLSSNLLTGEIPVGIGKLEKLAILQLG 531

  Fly   701 YNQISRIQSDVIGGWRNVVEIRL-SNNLIVELQQGTFRNLPKLQYLDLSSNEIRNVEPGALKGLD 764
            .|.::......:|..:|::.:.| ||||.        .|||.    :|:| :...|.||::.|  
plant   532 NNSLTGNIPSELGNCKNLIWLDLNSNNLT--------GNLPG----ELAS-QAGLVMPGSVSG-- 581

  Fly   765 ELQEFVLADNK----------LVELKDHVFEELPSLLASHF----QYNKLRYISPES---FHNAN 812
              ::|....|:          |||     ||.:.:....||    ...|.|..|..:   |.:..
plant   582 --KQFAFVRNEGGTDCRGAGGLVE-----FEGIRAERLEHFPMVHSCPKTRIYSGMTMYMFSSNG 639

  Fly   813 SLVFLNLSNNHFRNMENIGLRSMRNLEVLDLSTNGVKLVSTMPLKALNWLVELKMDNNQICRIQG 877
            |:::|:||.|.......:|..:|..|:||:|..|  .|..|:|                      
plant   640 SMIYLDLSYNAVSGSIPLGYGAMGYLQVLNLGHN--LLTGTIP---------------------- 680

  Fly   878 SPFETMPRLRVLSMRNNQLR-----SIKERTFRNVRGNIAILDVDGN----PIDCNCEMQWLSVW 933
            ..|..:..:.||.:.:|.|:     |:...:|      ::.|||..|    ||....::      
plant   681 DSFGGLKAIGVLDLSHNDLQGFLPGSLGGLSF------LSDLDVSNNNLTGPIPFGGQL------ 733

  Fly   934 LQETNFP------------YPGPKCQDG 949
               |.||            .|.|.|..|
plant   734 ---TTFPLTRYANNSGLCGVPLPPCSSG 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380 6/24 (25%)
PCC 891..>936 CDD:188093 10/53 (19%)
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914 88/342 (26%)
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
leucine-rich repeat 185..209 CDD:275380 2/3 (67%)
leucine-rich repeat 210..233 CDD:275380 8/23 (35%)
leucine-rich repeat 234..259 CDD:275380 7/24 (29%)
leucine-rich repeat 260..283 CDD:275380 8/27 (30%)
leucine-rich repeat 284..307 CDD:275380 3/23 (13%)
leucine-rich repeat 308..359 CDD:275380 7/50 (14%)
leucine-rich repeat 334..348 CDD:275378 0/13 (0%)
PLN00113 359..>824 CDD:215061 134/499 (27%)
leucine-rich repeat 360..383 CDD:275380 9/26 (35%)
leucine-rich repeat 384..407 CDD:275380 6/26 (23%)
leucine-rich repeat 408..431 CDD:275380 8/24 (33%)
leucine-rich repeat 432..455 CDD:275380 6/23 (26%)
leucine-rich repeat 456..476 CDD:275380 10/19 (53%)
leucine-rich repeat 480..501 CDD:275380 5/20 (25%)
leucine-rich repeat 505..517 CDD:275378 2/11 (18%)
leucine-rich repeat 525..550 CDD:275380 5/25 (20%)
leucine-rich repeat 551..574 CDD:275380 10/25 (40%)
leucine-rich repeat 575..598 CDD:275380 5/22 (23%)
leucine-rich repeat 599..622 CDD:275380 5/22 (23%)
leucine-rich repeat 623..646 CDD:275380 5/23 (22%)
leucine-rich repeat 647..670 CDD:275380 7/22 (32%)
leucine-rich repeat 671..693 CDD:275380 9/22 (41%)
leucine-rich repeat 694..717 CDD:275380 4/22 (18%)
leucine-rich repeat 718..741 CDD:275380 7/23 (30%)
leucine-rich repeat 742..763 CDD:275380 5/20 (25%)
leucine-rich repeat 766..789 CDD:275380 7/32 (22%)
leucine-rich repeat 790..813 CDD:275380 6/29 (21%)
leucine-rich repeat 814..835 CDD:275380 5/20 (25%)
leucine-rich repeat 838..861 CDD:275380 8/22 (36%)
leucine-rich repeat 862..885 CDD:275380 1/22 (5%)
BRL3NP_187946.1 PLN00113 32..1123 CDD:215061 202/808 (25%)
leucine-rich repeat 81..102 CDD:275380 8/20 (40%)
leucine-rich repeat 126..151 CDD:275380 10/30 (33%)
leucine-rich repeat 152..176 CDD:275380 3/23 (13%)
leucine-rich repeat 177..202 CDD:275380 7/50 (14%)
leucine-rich repeat 203..227 CDD:275380 9/26 (35%)
leucine-rich repeat 228..252 CDD:275380 6/26 (23%)
leucine-rich repeat 279..303 CDD:275380 6/23 (26%)
leucine-rich repeat 304..327 CDD:275380 10/22 (45%)
leucine-rich repeat 328..352 CDD:275380 9/42 (21%)
leucine-rich repeat 353..376 CDD:275380 6/26 (23%)
leucine-rich repeat 377..400 CDD:275380 9/22 (41%)
leucine-rich repeat 404..427 CDD:275380 5/22 (23%)
leucine-rich repeat 428..451 CDD:275380 5/22 (23%)
leucine-rich repeat 452..476 CDD:275380 5/23 (22%)
leucine-rich repeat 477..500 CDD:275380 7/22 (32%)
leucine-rich repeat 501..524 CDD:275380 9/22 (41%)
leucine-rich repeat 525..546 CDD:275380 4/20 (20%)
leucine-rich repeat 549..640 CDD:275380 27/112 (24%)
Island 572..636 CDD:466303 16/72 (22%)
leucine-rich repeat 641..664 CDD:275380 6/22 (27%)
leucine-rich repeat 665..688 CDD:275380 9/46 (20%)
leucine-rich repeat 689..712 CDD:275380 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.

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