DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and Igfals

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_445781.3 Gene:Igfals / 79438 RGDID:68429 Length:603 Species:Rattus norvegicus


Alignment Length:715 Identity:175/715 - (24%)
Similarity:277/715 - (38%) Gaps:200/715 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   140 LAITIQSEELKHLPDFSGLLSLTYLSVQTGA-------LQELPSHLFRHLPKLQHIHITGGSGLT 197
            |::...|:.|.||||        .:.|.|.|       |..:||..|::|..|..:::. ||.|.
  Rat    56 LSVFCSSKNLTHLPD--------DIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQ-GSWLR 111

  Fly   198 RLEAGLFDGLISLKNLDLSHNGLNWIHLRALSRLPNLVSLKLSHNQISDVGMVGR----IVKDLE 258
            .||.....||.:|.:|.|..|.|..:.:...:..|:|.||.||.|      ::||    :.:.|.
  Rat   112 SLEPQALLGLQNLYHLHLERNRLRNLAVGLFTHTPSLASLSLSSN------LLGRLEEGLFQGLS 170

  Fly   259 HLKKLRLDNNLITVIEDGSFVDLPNLSELHLNDNRITELQYGAFLRTPQLKTIYLQNNLIRRIHP 323
            ||..|.|..|.:.|:.|..|..|.||.||.|..|::|.||...|.                    
  Rat   171 HLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQPALFC-------------------- 215

  Fly   324 ESLLQASGSGVEAVHMYNNEIGHVEALRALLDALPRLRYLDMSGNLLSELPYGALRGHGTLEQLH 388
                                                                    |.|.|.:|.
  Rat   216 --------------------------------------------------------GLGELRELD 224

  Fly   389 LNHNHLRLIERDALMAMPALRELRMRNNSLSSDLPLPFWNLPGLKGLDLAQNQFARVDSQLLAGL 453
            |:.|.||.::.:..:.:|.|::|.:..|.:::..|..|..:..|:.|||:.|:.|.:......||
  Rat   225 LSRNALRSVKANVFVHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAGLMEDTFPGL 289

  Fly   454 PSLRRLDLSENGLIELAPNSFRHNPLLETLNISSNELTKIHSSTLIHLERLFEVDASYNQLKSVI 518
            ..|..|.|:.|.:..|.|.:|:....||.|.:..|.:.::.       ||.||            
  Rat   290 LGLHVLRLAHNAIASLRPRTFKDLHFLEELQLGHNRIRQLG-------ERTFE------------ 335

  Fly   519 AGLPRIVERISLKGNQITSLPAAASKDLQLPNLRMLDLSQNRIEQLPRHGFQGAMELRVLSLAQN 583
             ||.:: |.::|..||||.:...|                          |.|...:.|::|:.|
  Rat   336 -GLGQL-EVLTLNDNQITEVRVGA--------------------------FSGLFNVAVMNLSGN 372

  Fly   584 ELRQLKDTSFIGIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLEAITDNFFSNNSRLE 648
            .||.|.:..|.|:.:|..|||:.:.||.........|:.||.|.|:.|.:.:|.:...:..|.|.
  Rat   373 CLRSLPERVFQGLDKLHSLHLEHSCLGHVRLHTFAGLSGLRRLFLRDNSISSIEEQSLAGLSELL 437

  Fly   649 QLDLSRNLIRSISPTAFDTQRSLEYLDLSGNALLDISVGLGNLNNLRDIDLSYNQISRIQSDVIG 713
            :|||:.|.:..:....|.                    |||:|..|.   |||||::.:.::|:|
  Rat   438 ELDLTTNRLTHLPRQLFQ--------------------GLGHLEYLL---LSYNQLTTLSAEVLG 479

  Fly   714 GWRNVVEIRLSNNLIVELQQGTFRNLPKLQYLDLSSNEIRNVEPGALKGLDELQEFVLADN---- 774
            ..:....:.:|:|.:..|.:|.|.:|.:|:||.|.:|.::...|  ..||:.|.   |..|    
  Rat   480 PLQRAFWLDISHNHLETLAEGLFSSLGRLRYLSLRNNSLQTFSP--QPGLERLW---LDANPWDC 539

  Fly   775 --KLVELKDHVFEELPSLLASHFQ-------------YNKLRYISPESFHNANSLVFLNLSNNHF 824
              .|..|:|...:. |.::....|             ||.:....|.   |.:.|...::|..||
  Rat   540 SCPLKALRDFALQN-PGVVPRFVQTVCEGDDCQPVYTYNNITCAGPA---NVSGLDLRDVSETHF 600

  Fly   825  824
              Rat   601  600

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380
PCC 891..>936 CDD:188093
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914 97/400 (24%)
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380 7/19 (37%)
leucine-rich repeat 161..184 CDD:275380 8/29 (28%)
leucine-rich repeat 185..209 CDD:275380 8/23 (35%)
leucine-rich repeat 210..233 CDD:275380 5/22 (23%)
leucine-rich repeat 234..259 CDD:275380 9/28 (32%)
leucine-rich repeat 260..283 CDD:275380 8/22 (36%)
leucine-rich repeat 284..307 CDD:275380 9/22 (41%)
leucine-rich repeat 308..359 CDD:275380 0/50 (0%)
leucine-rich repeat 334..348 CDD:275378 0/13 (0%)
PLN00113 359..>824 CDD:215061 116/483 (24%)
leucine-rich repeat 360..383 CDD:275380 1/22 (5%)
leucine-rich repeat 384..407 CDD:275380 6/22 (27%)
leucine-rich repeat 408..431 CDD:275380 5/22 (23%)
leucine-rich repeat 432..455 CDD:275380 8/22 (36%)
leucine-rich repeat 456..476 CDD:275380 7/19 (37%)
leucine-rich repeat 480..501 CDD:275380 4/20 (20%)
leucine-rich repeat 505..517 CDD:275378 2/11 (18%)
leucine-rich repeat 525..550 CDD:275380 7/24 (29%)
leucine-rich repeat 551..574 CDD:275380 2/22 (9%)
leucine-rich repeat 575..598 CDD:275380 8/22 (36%)
leucine-rich repeat 599..622 CDD:275380 7/22 (32%)
leucine-rich repeat 623..646 CDD:275380 6/22 (27%)
leucine-rich repeat 647..670 CDD:275380 6/22 (27%)
leucine-rich repeat 671..693 CDD:275380 4/21 (19%)
leucine-rich repeat 694..717 CDD:275380 8/22 (36%)
leucine-rich repeat 718..741 CDD:275380 6/22 (27%)
leucine-rich repeat 742..763 CDD:275380 6/20 (30%)
leucine-rich repeat 766..789 CDD:275380 6/28 (21%)
leucine-rich repeat 790..813 CDD:275380 5/35 (14%)
leucine-rich repeat 814..835 CDD:275380 4/11 (36%)
leucine-rich repeat 838..861 CDD:275380
leucine-rich repeat 862..885 CDD:275380
IgfalsNP_445781.3 LRRNT 40..78 CDD:214470 9/29 (31%)
leucine-rich repeat 57..75 CDD:275380 6/25 (24%)
LRR 1 75..96 6/20 (30%)
leucine-rich repeat 79..99 CDD:275380 5/19 (26%)
LRR 85..476 CDD:443914 133/543 (24%)
LRR 2 99..120 6/21 (29%)
leucine-rich repeat 103..123 CDD:275380 7/20 (35%)
LRR 3 123..144 5/20 (25%)
LRR 4 147..168 8/26 (31%)
LRR 5 171..192 8/20 (40%)
leucine-rich repeat 175..195 CDD:275380 7/19 (37%)
LRR 6 195..216 10/96 (10%)
leucine-rich repeat 196..219 CDD:275380 10/98 (10%)
LRR 7 219..240 6/20 (30%)
leucine-rich repeat 220..243 CDD:275380 6/22 (27%)
LRR 8 243..264 5/20 (25%)
leucine-rich repeat 244..267 CDD:275380 5/22 (23%)
LRR 9 267..288 6/20 (30%)
leucine-rich repeat 268..291 CDD:275380 8/22 (36%)
LRR 10 291..312 7/20 (35%)
leucine-rich repeat 292..315 CDD:275380 7/22 (32%)
LRR 11 315..336 8/40 (20%)
leucine-rich repeat 316..339 CDD:275380 10/42 (24%)
LRR 12 339..360 8/47 (17%)
leucine-rich repeat 340..363 CDD:275380 9/49 (18%)
LRR 13 363..384 7/20 (35%)
leucine-rich repeat 364..387 CDD:275380 8/22 (36%)
LRR 14 387..408 6/20 (30%)
leucine-rich repeat 388..411 CDD:275380 7/22 (32%)
LRR 15 411..432 6/20 (30%)
leucine-rich repeat 412..435 CDD:275380 6/22 (27%)
LRR 16 435..456 6/40 (15%)
leucine-rich repeat 436..459 CDD:275380 8/42 (19%)
LRR 17 459..480 8/23 (35%)
leucine-rich repeat 460..481 CDD:275380 9/23 (39%)
LRR 18 483..504 5/20 (25%)
leucine-rich repeat 484..507 CDD:275380 6/22 (27%)
LRR_8 486..536 CDD:404697 16/54 (30%)
LRR 19 507..528 7/22 (32%)
LRRCT 535..578 CDD:214507 7/43 (16%)
Blue background indicates that the domain is not in the aligned region.

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