DRSC/TRiP Functional Genomics Resources

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Protein Alignment atk and LRFN3

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_078785.1 Gene:LRFN3 / 79414 HGNCID:28370 Length:628 Species:Homo sapiens


Alignment Length:951 Identity:174/951 - (18%)
Similarity:246/951 - (25%) Gaps:452/951 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly   534 QITSLPAAA------------SKDLQLPNLRMLDLSQNRIEQLPRHGFQGAMELRVLSLAQNELR 586
            |..|||.:.            |.|.:...||:.|   |.|..:.|........|..|||::|.:|
Human    35 QTQSLPLSVLCPGAGLLFVPPSLDRRAAELRLAD---NFIASVRRRDLANMTGLLHLSLSRNTIR 96

  Fly   587 QLKDTSFIGIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLEAITDNFFSNNSRLEQLD 651
            .:...:|..::.|..|||..|:|....|..|..|..||:|.|.:|:|.|                
Human    97 HVAAGAFADLRALRALHLDGNRLTSLGEGQLRGLVNLRHLILSNNQLAA---------------- 145

  Fly   652 LSRNLIRSISPTAFDTQRSLEYLDLSGNALLDISVGLGNLNNLRDIDLSYNQISRIQSDVIGGWR 716
                                    |:..||.|.:      ..|.|:|||||.:.::..:.:|...
Human   146 ------------------------LAAGALDDCA------ETLEDLDLSYNNLEQLPWEALGRLG 180

  Fly   717 NVVEIRLSNNLIVELQQGTFRNLPKLQYLDLSSNEIRNVEPGALKGLDELQEFVLADNKLVELKD 781
            ||..:.|.:||:..:..|.|..|.||..||::||.:..:.|                       |
Human   181 NVNTLGLDHNLLASVPAGAFSRLHKLARLDMTSNRLTTIPP-----------------------D 222

  Fly   782 HVFEELPSLLASHFQYNKLRYISPESFHNANSLVFLNLSNNHFRNMENIGLRSMRNLEVLDLSTN 846
            .:|..|| |||                                                      
Human   223 PLFSRLP-LLA------------------------------------------------------ 232

  Fly   847 GVKLVSTMPLKALNWLVELKMDNNQICRIQGSPFETMPRLRVLSMRNNQLRSIKERTFRNVRGNI 911
                                       |.:|||...:                            
Human   233 ---------------------------RPRGSPASAL---------------------------- 242

  Fly   912 AILDVDGNPIDCNCEMQWLSVWLQETNFPYPGPKCQDGRLLRSARMERSLCVGADIYGNERTDGN 976
             :|...|||:.||||:.||.                  ||.|                       
Human   243 -VLAFGGNPLHCNCELVWLR------------------RLAR----------------------- 265

  Fly   977 QLPLLNEHGDVFQRDLPDDFNDECEAGEGTRLPGDRPL--VGESEYFYDQYVDATEAPDTTHSAI 1039
                                .|:.||.......|.|..  |||.|:       ..|.|..||   
Human   266 --------------------EDDLEACASPPALGGRYFWAVGEEEF-------VCEPPVVTH--- 300

  Fly  1040 STSQRPKPTPTINSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRFFGFGDRGRKQ 1104
                                         |.|             || :|..||           
Human   301 -----------------------------RSP-------------PL-AVPAGR----------- 311

  Fly  1105 RTDSNDDMPATHRMAHISLPSGRGKTRMYQPNSAEFEKYLKDQQKQEKLNIARNRYVDTDSTTSS 1169
                    ||..|...:..|..|  .|...|              |.:|                
Human   312 --------PAALRCRAVGDPEPR--VRWVSP--------------QGRL---------------- 336

  Fly  1170 MEDALSNESGSAATTVGVFRTTFREPSSIERGGFRPIVPAHVGGFMPVHDPQQRRGLVEVVNITG 1234
                |.|.|.:.|...|.......||..   ||....:.|:..|           .....|.:|.
Human   337 ----LGNSSRARAFPNGTLELLVTEPGD---GGIFTCIAANAAG-----------EATAAVELTV 383

  Fly  1235 NPSEIVQGIGQRKFIPISTQARP----KPTKSSGESSETATYEVTETTP------DIT---TTTP 1286
            .|....|       :..||...|    .|...:..|:.:|:.:|.:|.|      .:|   .|..
Human   384 GPPPPPQ-------LANSTSCDPPRDGDPDALTPPSAASASAKVADTGPPTDRGVQVTEHGATAA 441

  Fly  1287 LM----QRIATSTTKASTTTTRSTTTTSTTQVTPAENNASSSTELDS----------QYDDEDLE 1337
            |:    ||..............|.......::.|||:.:...|:|.|          .|:|   .
Human   442 LVQWPDQRPIPGIRMYQIQYNSSADDILVYRMIPAESRSFLLTDLASGRTYDLCVLAVYED---S 503

  Fly  1338 AQSVTLLRPPPLVQTTTAETI--------------------------------LLIPPAEEHVAQ 1370
            |..:|..||....:.:|...:                                :|:...:.|..|
Human   504 ATGLTATRPVGCARFSTEPALRPCGAPHAPFLGGTMIIALGGVIVASVLVFIFVLLMRYKVHGGQ 568

  Fly  1371 IKSRSWVTTTTPQSPSDNQVTLA-GPTSTVPPPPPASPPLR 1410
            ...::.:  ..|.|...:|...| |||.|..||.|....||
Human   569 PPGKAKI--PAPVSSVCSQTNGALGPTPTPAPPAPEPAALR 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380 0/19 (0%)
PCC 891..>936 CDD:188093 10/44 (23%)
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
leucine-rich repeat 185..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..259 CDD:275380
leucine-rich repeat 260..283 CDD:275380
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..359 CDD:275380
leucine-rich repeat 334..348 CDD:275378
PLN00113 359..>824 CDD:215061 69/301 (23%)
leucine-rich repeat 360..383 CDD:275380
leucine-rich repeat 384..407 CDD:275380
leucine-rich repeat 408..431 CDD:275380
leucine-rich repeat 432..455 CDD:275380
leucine-rich repeat 456..476 CDD:275380
leucine-rich repeat 480..501 CDD:275380
leucine-rich repeat 505..517 CDD:275378
leucine-rich repeat 525..550 CDD:275380 6/27 (22%)
leucine-rich repeat 551..574 CDD:275380 6/22 (27%)
leucine-rich repeat 575..598 CDD:275380 7/22 (32%)
leucine-rich repeat 599..622 CDD:275380 9/22 (41%)
leucine-rich repeat 623..646 CDD:275380 7/22 (32%)
leucine-rich repeat 647..670 CDD:275380 0/22 (0%)
leucine-rich repeat 671..693 CDD:275380 4/21 (19%)
leucine-rich repeat 694..717 CDD:275380 8/22 (36%)
leucine-rich repeat 718..741 CDD:275380 7/22 (32%)
leucine-rich repeat 742..763 CDD:275380 6/20 (30%)
leucine-rich repeat 766..789 CDD:275380 3/22 (14%)
leucine-rich repeat 790..813 CDD:275380 3/22 (14%)
leucine-rich repeat 814..835 CDD:275380 0/20 (0%)
leucine-rich repeat 838..861 CDD:275380 0/22 (0%)
leucine-rich repeat 862..885 CDD:275380 4/22 (18%)
LRFN3NP_078785.1 LRR 1 60..83 6/25 (24%)
LRR <63..>228 CDD:443914 58/236 (25%)
leucine-rich repeat 63..84 CDD:275380 6/23 (26%)
LRR 2 84..105 7/20 (35%)
leucine-rich repeat 85..108 CDD:275380 7/22 (32%)
LRR 3 108..129 8/20 (40%)
leucine-rich repeat 109..132 CDD:275380 9/22 (41%)
LRR 4 132..153 10/60 (17%)
leucine-rich repeat 133..157 CDD:275380 11/69 (16%)
LRR 5 157..178 7/20 (35%)
leucine-rich repeat 158..181 CDD:275380 8/22 (36%)
LRR 6 181..202 7/20 (35%)
leucine-rich repeat 182..205 CDD:275380 7/22 (32%)
LRR 7 205..226 8/43 (19%)
leucine-rich repeat 206..230 CDD:275380 10/47 (21%)
leucine-rich repeat 242..253 CDD:275378 4/39 (10%)
LRRCT 249..>281 CDD:214507 15/92 (16%)
Ig 296..383 CDD:472250 31/201 (15%)
Ig strand B 313..317 CDD:409353 1/3 (33%)
Ig strand C 326..330 CDD:409353 2/5 (40%)
Ig strand E 349..353 CDD:409353 1/3 (33%)
Ig strand F 363..368 CDD:409353 0/4 (0%)
Ig strand G 376..379 CDD:409353 0/2 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 382..430 12/54 (22%)
fn3 424..502 CDD:394996 14/77 (18%)
Blue background indicates that the domain is not in the aligned region.

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