DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and Tlr8

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_001094479.1 Gene:Tlr8 / 684440 RGDID:1590327 Length:1029 Species:Rattus norvegicus


Alignment Length:907 Identity:229/907 - (25%)
Similarity:376/907 - (41%) Gaps:171/907 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 LVSLKLSHNQISDVGM-VGRIVKDLEHLKKLRLDNNLITVIEDGSFVDLPNLSELHLNDN----- 292
            ||:.:.:|.|:.:|.. :|:.|.|::      |.:|.|..|.:.||....||::::||.|     
  Rat    41 LVTAECNHRQLHEVPQTIGKYVTDVD------LSDNTIMHITNESFQKFRNLTKINLNHNAKQQH 99

  Fly   293 --------RITELQYGAFLRTPQLKTIYLQNNLIRRIH---PESLLQAS---------------G 331
                    .|||   ||||....|..:.|::|.:..|.   ||||.:.|               |
  Rat   100 PNENKNGMNITE---GAFLSLRNLTELLLEDNQLYTIPAGLPESLKELSLIQNNIFQVTKNNTFG 161

  Fly   332 -SGVEAVHM-YN-----NEIGHVE--ALRALLDALPRLRYLDMSGNLLSELPYGALRGHGTLEQL 387
             ..:|.::: :|     |:|..||  |...|::    |:.|.:|.|.|..:|   .:...:|.:|
  Rat   162 LRNLERLYLGWNCYFKCNQIFKVEDGAFNNLIN----LKLLSLSFNNLFSVP---PKLPSSLSKL 219

  Fly   388 HLNHNHLRLIERDALMAMPALRELRMRNN--------------SLSSDL---PLPFWNLPGLKGL 435
            .|::..:..|.::....:..|..|.:..|              :||:.:   ||.|.||..|:.|
  Rat   220 FLSNAKISTITQEDFKGLEHLILLDLSGNCPRCFNAPFPCESCNLSASIRIHPLAFQNLTQLRFL 284

  Fly   436 DLAQNQFARVDSQLLAGLPSLRRLDLSENGLI-ELAPNSFRHN-PLLETLNISSNELTKIHSSTL 498
            :|:......:.|.....|.:|:.|.|..|.|: |:|..:|... |.|:||::|.|         .
  Rat   285 NLSSTSLRTIPSTWFDNLTNLKELHLEFNYLVQEIASGAFLTKLPSLQTLDLSFN---------F 340

  Fly   499 IHLERL--FEVDASYNQLKSVIAGLPRIVERISLKGNQITSLPAAASKDLQ-LPNLRMLDLSQNR 560
            ||.|.|  ..:..:::.|:|        :.::.|||.....|.....|.|| ||||..::|..|.
  Rat   341 IHKEYLQYITISPNFSMLRS--------LRKLHLKGYVFRELKKEHFKPLQNLPNLTTINLGINF 397

  Fly   561 IEQLPRHGFQGAMELRVLSLAQNELRQLKDTSFIGIQRLELLHLQENQLGEAD---------ERA 616
            ||::....||....|:|:.|:.|.:..:.|.:.....|..|.........|.|         |..
  Rat   398 IEKIDFKAFQDFPNLKVIYLSGNRIASVIDGTDHSSWRNRLRKPLSTDYDEFDPHMNFYHSTEPL 462

  Fly   617 LLPLAEL--RNLNLQSNKLEAITDNFFSNNSRLEQLDLSRNLI-RSISPTAFDTQRSLEYLDLSG 678
            :.|....  :.|:|..|.:..|..:.|.....:..|:||.|.. :.::.|.|.:...::||||:.
  Rat   463 IKPQCTTYGKALDLSLNNIFVIGKSQFEGFQDIACLNLSFNANGQVLNGTEFSSMPHIKYLDLTN 527

  Fly   679 NAL-LDISVGLGNLNNLRDIDLSYNQISRIQSDVIGGWRNVVEIRLSNNLIVELQQGTFRNLPKL 742
            |.| .|.:....:|::|..:|||:|    .....|.|    |..||          |..:||.||
  Rat   528 NRLDFDDNQTFSDLHDLEVLDLSHN----AHYFSIAG----VTHRL----------GFIQNLIKL 574

  Fly   743 QYLDLSSNEIRNVEPGALKGLDELQEFVLADNKLVELKD-------HVFEELPSLLASHFQYNKL 800
            :.|:||.|.|..:..........|:|.|.:.|:|..|.:       .:|..|.:|......||.|
  Rat   575 KVLNLSHNGIYTLTDEYKLQSKSLKELVFSGNRLDRLWNANDGKYWSIFTSLETLTRLDLSYNNL 639

  Fly   801 RYISPESFHN-ANSLVFLNLSNNHFRNMENIGLRSMRNLEVLDLSTNGVKLVSTMPLKALNWLVE 864
            :.|..|:|.| ..||..|::::|..|......|:...:|.||||..|.:..::....|..:.|..
  Rat   640 QQIPNEAFLNLPQSLQELHINDNRLRFFNWTLLQYFPHLHVLDLGRNELYFLTNCLSKFTHSLKT 704

  Fly   865 LKMDNNQICRIQGSPFETMPRLRVLSMRNNQLRSIKERTFR-NVRGNIAILDVDGNPIDCNCEMQ 928
            |.:::|....:..........|..|.:..|.::.|.:.:.: ..:.|:::||:.||..||.|::.
  Rat   705 LLLNHNHFSHLPAGFLSEARNLVYLDLSFNTIKMINKSSLQTETKTNLSVLDLQGNHFDCTCDIS 769

  Fly   929 WLSVWLQETNFPY-------------PGPKCQDGRLLRSARMERSLCVGAD------IYGNERTD 974
            ....||:|.  |:             ||    |.|......::.:.||...      .:....|.
  Rat   770 DFRSWLEEN--PHVRIPRLVDVICSNPG----DQRWKSVMSLDLTTCVSDTTAAILFFFTFLTTS 828

  Fly   975 GNQLPLLNEHGDVFQRDLPDDFNDECEAGEGTRLPGDRPLVGESEYFYDQYV--DATEAPDT 1034
            ...|..|..|  :|..|:...:: .|.|    :|.|.|. ...|:.|||.|:  |..:|..|
  Rat   829 TVLLAALVHH--LFYWDVWFIYH-MCSA----KLRGYRS-SSTSQTFYDAYISYDTKDASVT 882

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380 4/20 (20%)
PCC 891..>936 CDD:188093 12/45 (27%)
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914 89/357 (25%)
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
leucine-rich repeat 185..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..259 CDD:275380 8/25 (32%)
leucine-rich repeat 260..283 CDD:275380 6/22 (27%)
leucine-rich repeat 284..307 CDD:275380 11/35 (31%)
leucine-rich repeat 308..359 CDD:275380 18/77 (23%)
leucine-rich repeat 334..348 CDD:275378 4/19 (21%)
PLN00113 359..>824 CDD:215061 132/507 (26%)
leucine-rich repeat 360..383 CDD:275380 6/22 (27%)
leucine-rich repeat 384..407 CDD:275380 4/22 (18%)
leucine-rich repeat 408..431 CDD:275380 10/39 (26%)
leucine-rich repeat 432..455 CDD:275380 5/22 (23%)
leucine-rich repeat 456..476 CDD:275380 8/20 (40%)
leucine-rich repeat 480..501 CDD:275380 6/20 (30%)
leucine-rich repeat 505..517 CDD:275378 1/11 (9%)
leucine-rich repeat 525..550 CDD:275380 8/25 (32%)
leucine-rich repeat 551..574 CDD:275380 7/22 (32%)
leucine-rich repeat 575..598 CDD:275380 5/22 (23%)
leucine-rich repeat 599..622 CDD:275380 5/31 (16%)
leucine-rich repeat 623..646 CDD:275380 5/24 (21%)
leucine-rich repeat 647..670 CDD:275380 6/23 (26%)
leucine-rich repeat 671..693 CDD:275380 8/22 (36%)
leucine-rich repeat 694..717 CDD:275380 7/22 (32%)
leucine-rich repeat 718..741 CDD:275380 6/22 (27%)
leucine-rich repeat 742..763 CDD:275380 6/20 (30%)
leucine-rich repeat 766..789 CDD:275380 8/29 (28%)
leucine-rich repeat 790..813 CDD:275380 8/23 (35%)
leucine-rich repeat 814..835 CDD:275380 5/20 (25%)
leucine-rich repeat 838..861 CDD:275380 7/22 (32%)
leucine-rich repeat 862..885 CDD:275380 3/22 (14%)
Tlr8NP_001094479.1 leucine-rich repeat 62..85 CDD:275380 8/28 (29%)
LRR 75..481 CDD:443914 109/432 (25%)
leucine-rich repeat 86..119 CDD:275380 11/35 (31%)
leucine-rich repeat 120..140 CDD:275380 5/19 (26%)
leucine-rich repeat 141..164 CDD:275380 3/22 (14%)
leucine-rich repeat 165..194 CDD:275380 8/28 (29%)
leucine-rich repeat 195..215 CDD:275380 6/22 (27%)
leucine-rich repeat 216..239 CDD:275380 4/22 (18%)
leucine-rich repeat 240..280 CDD:275380 10/39 (26%)
leucine-rich repeat 281..304 CDD:275380 5/22 (23%)
leucine-rich repeat 305..324 CDD:275380 7/18 (39%)
leucine-rich repeat 331..387 CDD:275380 19/72 (26%)
leucine-rich repeat 388..411 CDD:275380 7/22 (32%)
leucine-rich repeat 467..494 CDD:275380 5/26 (19%)
leucine-rich repeat 495..510 CDD:275380 4/14 (29%)
LRR 498..>761 CDD:443914 74/280 (26%)
leucine-rich repeat 520..543 CDD:275380 8/22 (36%)
leucine-rich repeat 544..573 CDD:275380 13/46 (28%)
leucine-rich repeat 574..597 CDD:275380 6/22 (27%)
leucine-rich repeat 598..628 CDD:275380 8/29 (28%)
leucine-rich repeat 629..653 CDD:275380 8/23 (35%)
leucine-rich repeat 654..677 CDD:275380 5/22 (23%)
leucine-rich repeat 678..701 CDD:275380 7/22 (32%)
leucine-rich repeat 702..725 CDD:275380 3/22 (14%)
leucine-rich repeat 726..745 CDD:275380 4/18 (22%)
PCC 730..>813 CDD:188093 20/88 (23%)
TIR 868..1004 CDD:214587 6/15 (40%)
Blue background indicates that the domain is not in the aligned region.

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