DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and igfals

DIOPT Version :9

Sequence 1:NP_001262113.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:XP_003198203.1 Gene:igfals / 570758 ZFINID:ZDB-GENE-061009-25 Length:614 Species:Danio rerio


Alignment Length:589 Identity:161/589 - (27%)
Similarity:262/589 - (44%) Gaps:83/589 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   261 KKLRLDNNLITVIEDGSFVDLPNLSELHLNDNRITELQYGAFLRTPQLKTIYLQNNLIRRIHPES 325
            :.|.||.||.:.:..|:|..|.||..|:|..:.:..|...||.....|..::|:.|.:|.:  ..
Zfish    85 RSLWLDGNLFSNLPAGAFEKLTNLEFLNLQSSLLVSLDAHAFRGLNSLAHLHLERNNLRSL--SG 147

  Fly   326 LLQASGSGVEAVHMYNNEIGHVEALRALLDALPRLRYLDMSGNLLSELPYGALRGHGTLEQLHLN 390
            |:....|.:..:.:.||::..::  ..|...:..:..|::..||||.||      ....:.||  
Zfish   148 LVFQGTSNLATLSLNNNQMFRID--DRLFAGMSHMWLLNLGWNLLSVLP------ETGFQDLH-- 202

  Fly   391 HNHLRLIERDALMAMPALRELRMRNNSLSSDLPLPFWNLPGLKGLDLAQNQFARVDSQLLAGLPS 455
                            .||||.:..|.|:...|..|..|..||.|||..|....:.:.:...||.
Zfish   203 ----------------GLRELILAGNRLAYLQPQLFQGLNELKELDLTGNYLKVIKANVFLKLPK 251

  Fly   456 LRRLDLSENGLIELAPNSFRHNPLLETLNISSNELTKIHSSTLIHLERLFEVDASYNQLKSVIAG 520
            |::|.|.:|.::.:||.:|.....|..|::|.|.||.:|..|.|.|:.|..:..|.|.:.|:..|
Zfish   252 LQKLYLGQNQIVTVAPRAFVGMKSLRWLDLSRNRLTVLHDETFIGLQSLHVLRLSNNSINSLRPG 316

  Fly   521 LPR---IVERISLKGNQITSLPAAASKDLQLPNLRMLDLSQNRIEQLPRHGFQGAMELRVLSLAQ 582
            ..|   .:|.:.|..|||.:|.....:.  |.:|.:|:|..||:::.....|.|...|.|:.|..
Zfish   317 TFRDLQYLEELCLYHNQIRALGVRVFEG--LGHLEVLNLENNRLQEARMGTFMGLNHLAVMKLTG 379

  Fly   583 NELRQLKDTSFIGIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLEAITDNFFSNNSRL 647
            :....|.|..|.|:.:|..:||..:.|.:...::...|..||.|.||.|.:..:....|....||
Zfish   380 SCFHSLPDQVFKGLSKLHSIHLDRSCLTKVSSQSFSGLTGLRRLFLQHNNISLVERQSFVELQRL 444

  Fly   648 EQLDLSRNLIRSISPTAFDTQRSLEYLDLSGNALLDI-SVGLGNLNNLRDIDLSYNQISRIQSDV 711
            :||||..|.:.:|:...|...::|:||.||||.|.:: :..|..|.:|..:|||.|::..|.:  
Zfish   445 QQLDLRFNKLTTITSNTFYGLKNLDYLLLSGNLLHNLPAEALLPLQHLSWLDLSGNKLELILN-- 507

  Fly   712 IGGWRNVVEIRLSNNLIVELQQGTFRNLPKLQYLDLSSNEIRNVEPGALKGLDEL---------- 766
                                  .|...||:|:||:|..|.:.|:.....:.||:|          
Zfish   508 ----------------------ATIYMLPRLRYLNLKDNILVNLPVSIPESLDQLWLSGNNWKCD 550

  Fly   767 ------QEFVLADNKLVELKDHVF---EELPSLLASHFQYNKLRYISPESFHNANSLVFLNLSNN 822
                  ::|:|...::|.|:..:.   ||..:|:.   .||.:...||.|   |:.|...|::..
Zfish   551 CSAKPFRDFILQKPQVVPLQVEMLGEGEEPHTLIT---VYNNVTCASPSS---ASGLDLRNIAAE 609

  Fly   823 HFRN 826
            |||:
Zfish   610 HFRD 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_001262113.1 leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
LRR_8 183..244 CDD:290566
leucine-rich repeat 185..209 CDD:275380
LRR_4 209..247 CDD:289563
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..259 CDD:275380
LRR_RI 250..492 CDD:238064 62/230 (27%)
LRR_8 259..318 CDD:290566 18/56 (32%)
leucine-rich repeat 260..283 CDD:275380 8/21 (38%)
leucine-rich repeat 284..307 CDD:275380 6/22 (27%)
leucine-rich repeat 308..359 CDD:275380 9/50 (18%)
leucine-rich repeat 334..348 CDD:275378 2/13 (15%)
LRR_8 358..418 CDD:290566 14/59 (24%)
leucine-rich repeat 360..383 CDD:275380 7/22 (32%)
leucine-rich repeat 384..407 CDD:275380 2/22 (9%)
LRR_8 406..466 CDD:290566 21/59 (36%)
leucine-rich repeat 408..431 CDD:275380 9/22 (41%)
leucine-rich repeat 432..455 CDD:275380 7/22 (32%)
LRR_RI 447..705 CDD:238064 82/261 (31%)
LRR_8 454..514 CDD:290566 21/59 (36%)
leucine-rich repeat 456..476 CDD:275380 7/19 (37%)
leucine-rich repeat 480..501 CDD:275380 9/20 (45%)
leucine-rich repeat 505..517 CDD:275378 2/11 (18%)
leucine-rich repeat 525..550 CDD:275380 7/24 (29%)
LRR_8 549..609 CDD:290566 17/59 (29%)
leucine-rich repeat 551..574 CDD:275380 7/22 (32%)
leucine-rich repeat 575..598 CDD:275380 7/22 (32%)
leucine-rich repeat 599..622 CDD:275380 5/22 (23%)
LRR_8 622..681 CDD:290566 23/58 (40%)
leucine-rich repeat 623..646 CDD:275380 7/22 (32%)
LRR_RI 647..896 CDD:238064 54/200 (27%)
leucine-rich repeat 647..670 CDD:275380 8/22 (36%)
leucine-rich repeat 671..693 CDD:275380 10/22 (45%)
leucine-rich repeat 694..717 CDD:275380 6/22 (27%)
LRR_8 716..776 CDD:290566 14/75 (19%)
leucine-rich repeat 718..741 CDD:275380 2/22 (9%)
leucine-rich repeat 742..763 CDD:275380 6/20 (30%)
LRR_8 765..824 CDD:290566 16/77 (21%)
leucine-rich repeat 766..789 CDD:275380 7/41 (17%)
leucine-rich repeat 790..813 CDD:275380 7/22 (32%)
leucine-rich repeat 814..835 CDD:275380 5/13 (38%)
leucine-rich repeat 838..861 CDD:275380
LRR_8 862..921 CDD:290566
leucine-rich repeat 862..885 CDD:275380
leucine-rich repeat 886..906 CDD:275380
TPKR_C2 919..>946 CDD:301599
igfalsXP_003198203.1 LRRNT 48..81 CDD:279764
leucine-rich repeat 65..83 CDD:275380
leucine-rich repeat 84..107 CDD:275380 8/21 (38%)
LRR_8 85..142 CDD:290566 18/56 (32%)
leucine-rich repeat 108..131 CDD:275380 6/22 (27%)
LRR_8 131..214 CDD:290566 23/110 (21%)
leucine-rich repeat 132..155 CDD:275380 5/24 (21%)
leucine-rich repeat 156..203 CDD:275380 12/72 (17%)
leucine-rich repeat 204..227 CDD:275380 9/22 (41%)
LRR_RI <219..456 CDD:238064 74/238 (31%)
LRR_8 227..286 CDD:290566 19/58 (33%)
leucine-rich repeat 228..251 CDD:275380 7/22 (32%)
leucine-rich repeat 252..275 CDD:275380 7/22 (32%)
LRR_8 274..334 CDD:290566 19/59 (32%)
leucine-rich repeat 276..299 CDD:275380 10/22 (45%)
leucine-rich repeat 300..323 CDD:275380 6/22 (27%)
leucine-rich repeat 324..347 CDD:275380 7/24 (29%)
leucine-rich repeat 348..369 CDD:275380 6/20 (30%)
LRR_8 371..430 CDD:290566 18/58 (31%)
leucine-rich repeat 396..419 CDD:275380 5/22 (23%)
LRR_8 418..478 CDD:290566 23/59 (39%)
leucine-rich repeat 420..443 CDD:275380 7/22 (32%)
leucine-rich repeat 444..467 CDD:275380 8/22 (36%)
LRR_8 466..524 CDD:290566 23/81 (28%)
leucine-rich repeat 468..486 CDD:275380 8/17 (47%)
leucine-rich repeat 492..515 CDD:275380 8/46 (17%)
leucine-rich repeat 516..540 CDD:275380 8/23 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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