DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and tril

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:XP_009292463.1 Gene:tril / 448885 ZFINID:ZDB-GENE-131218-1 Length:758 Species:Danio rerio


Alignment Length:802 Identity:166/802 - (20%)
Similarity:279/802 - (34%) Gaps:227/802 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   572 AMELRVLSLAQNELRQLKDTSFIGIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLEAI 636
            |.::||||||.|.:..:....|                        :...:|..||||.|::.:|
Zfish    57 AEDVRVLSLAGNFIHNISAFDF------------------------MRYGDLMRLNLQFNQIRSI 97

  Fly   637 TDNFFSNNSRLEQLDLSRNLIRSISPTAFDTQRSLEYLDLSGNALLDISVGLGNLNNLRDIDLSY 701
            ....|...|:||:|.|..|||.:|.|                          |.|.:|:.:.:.|
Zfish    98 HPESFKKLSKLEELFLGNNLISTIQP--------------------------GTLQSLKKLTILY 136

  Fly   702 ---NQISRIQSDVIGGWRNVVEIRLSNNLIVELQQGTFRNLPKLQYLDLSSNEIRNVEPGALKGL 763
               |:|:...........::|::||..|.|..|::..|..||.|.:|.|.||.:|.::..|...|
Zfish   137 SNNNEINECIPKSFTHLNSLVKLRLDGNSIEVLKESVFEGLPNLMFLHLESNHLRRIDRNAFLRL 201

  Fly   764 DELQEFVLADNKLVELKD-HVFEELPSLLASHFQYNKLRYISPESFHNANSLVFLNLSNNHFRNM 827
            .:||...|:|||..||:| .:|.:|.||.......|::|::....|.:...|..|:||:|....:
Zfish   202 SKLQFLNLSDNKQTELQDVFMFSDLKSLKTLLIAGNQIRHVGNHVFQSLKKLSKLSLSHNKISKL 266

  Fly   828 ENIGLRSMRNLEVLDLSTNGVKLVSTMPLKALNWLVELKMDNNQICRIQGSPFETMPRLRVLSMR 892
            .|...:.:..:....:..|.:..:....|..|..:..|...:|.|..:....|..:..|::|.::
Zfish   267 GNEAFKGLGRVREFMIDRNELTEIPAGLLDPLERIEHLDFSDNHISLVDQGAFGHLSHLKILKLK 331

  Fly   893 NNQLRSIKERTFRNVRGNIAILDVDGNPIDCNCEMQWLSVWLQETNFPYPGPKCQDGRLLR-SAR 956
            ||:|.::....|.: .|.:..::::||...|:|.|:.|..|:...:        ..|:||. ..|
Zfish   332 NNRLMNLSGSIFAS-NGGLFHVELNGNNWTCDCRMEKLKSWMTHAH--------SQGKLLTVFVR 387

  Fly   957 MERSLCVGADIYGNERTD---GNQL----------PL---LNEHGDVFQRDLPDDFNDECEAGEG 1005
                 |:...:...:..|   ..||          ||   :...|.|.:..:..:..::.|..:.
Zfish   388 -----CLHPPVLAGKYLDYVSNLQLKNMSGFCESEPLSQPMESRGAVVETPVFKEEREKREKHDE 447

  Fly  1006 TRLPGDRPLVGESEYFYDQYVDATEAPDTT----HSAISTSQRPKPTPTINSNIDLNNTILHTKY 1066
            ..:.||:.:.|               |.||    ......|.|||||        ..||      
Zfish   448 VEVQGDQGVQG---------------PGTTLKRKKKRKLASSRPKPT--------ARNT------ 483

  Fly  1067 FNRKPQPGSGSPFTFFGYPLPSVSLGRFFGFGDRGRKQRTDSNDDMPATHRMAHISLPSGRGKTR 1131
                   |:||....|      .::..|.                             .|...:.
Zfish   484 -------GNGSLSDLF------TTMAMFL-----------------------------EGHNYST 506

  Fly  1132 MYQPNSAEFEKYLKDQQKQE--------------KLNIARNRYVDTDSTTSSMEDALSNESGSAA 1182
            .......:|...|:||.|.|              :|:|......|..|.|:::..:.:.::|.|.
Zfish   507 FALTPQEQFNLPLQDQSKYEDSKTAGIADACQFNRLSILNVSVEDITSITATVRWSTTPDTGLAH 571

  Fly  1183 TTVGVFRT-------TFREPSSIERGG---------FRP------------------IVPA-HVG 1212
            .....||.       .||.|..:...|         .||                  :.|. |..
Zfish   572 GKELHFRVLFDRFGHAFRFPRYVYTDGSDRAVTLQELRPESTYITCVESVVDGTLCKVAPRDHCT 636

  Fly  1213 GF---MPVHDPQQRRGLVEVVNITGNP--SEIVQGIGQRKFIPISTQARPKPTKSSGESSETATY 1272
            ||   :|....:....|:.|..:..|.  ..:|.|:...:.:    :.|.:..|||..:.....|
Zfish   637 GFVTLLPSVTTEVNLQLITVAALAANALLLLLVGGVWLGRVL----KRRIRSRKSSAHAHVRHMY 697

  Fly  1273 EVTETTPDITTTTPLMQRIATS 1294
                     :|..|....:||:
Zfish   698 ---------STRHPFRSTVATT 710

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380 6/19 (32%)
PCC 891..>936 CDD:188093 12/44 (27%)
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
leucine-rich repeat 185..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..259 CDD:275380
leucine-rich repeat 260..283 CDD:275380
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..359 CDD:275380
leucine-rich repeat 334..348 CDD:275378
PLN00113 359..>824 CDD:215061 71/255 (28%)
leucine-rich repeat 360..383 CDD:275380
leucine-rich repeat 384..407 CDD:275380
leucine-rich repeat 408..431 CDD:275380
leucine-rich repeat 432..455 CDD:275380
leucine-rich repeat 456..476 CDD:275380
leucine-rich repeat 480..501 CDD:275380
leucine-rich repeat 505..517 CDD:275378
leucine-rich repeat 525..550 CDD:275380
leucine-rich repeat 551..574 CDD:275380 1/1 (100%)
leucine-rich repeat 575..598 CDD:275380 8/22 (36%)
leucine-rich repeat 599..622 CDD:275380 0/22 (0%)
leucine-rich repeat 623..646 CDD:275380 8/22 (36%)
leucine-rich repeat 647..670 CDD:275380 9/22 (41%)
leucine-rich repeat 671..693 CDD:275380 2/21 (10%)
leucine-rich repeat 694..717 CDD:275380 4/25 (16%)
leucine-rich repeat 718..741 CDD:275380 8/22 (36%)
leucine-rich repeat 742..763 CDD:275380 7/20 (35%)
leucine-rich repeat 766..789 CDD:275380 11/23 (48%)
leucine-rich repeat 790..813 CDD:275380 4/22 (18%)
leucine-rich repeat 814..835 CDD:275380 6/20 (30%)
leucine-rich repeat 838..861 CDD:275380 3/22 (14%)
leucine-rich repeat 862..885 CDD:275380 4/22 (18%)
trilXP_009292463.1 LRRNT 25..56 CDD:214470
leucine-rich repeat 60..83 CDD:275380 8/46 (17%)
LRR <83..>242 CDD:443914 56/184 (30%)
leucine-rich repeat 84..107 CDD:275380 8/22 (36%)
leucine-rich repeat 108..131 CDD:275380 12/48 (25%)
leucine-rich repeat 132..155 CDD:275380 3/22 (14%)
leucine-rich repeat 156..179 CDD:275380 8/22 (36%)
leucine-rich repeat 180..203 CDD:275380 8/22 (36%)
leucine-rich repeat 204..228 CDD:275380 11/23 (48%)
leucine-rich repeat 229..252 CDD:275380 4/22 (18%)
leucine-rich repeat 253..276 CDD:275380 6/22 (27%)
LRR_8 259..311 CDD:404697 8/51 (16%)
leucine-rich repeat 277..298 CDD:275380 2/20 (10%)
LRR_8 300..358 CDD:404697 12/58 (21%)
leucine-rich repeat 301..324 CDD:275380 4/22 (18%)
leucine-rich repeat 325..348 CDD:275380 6/23 (26%)
FN3 546..614 CDD:214495 13/67 (19%)
Blue background indicates that the domain is not in the aligned region.

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