DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and Xrra1

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:XP_017177834.1 Gene:Xrra1 / 446101 MGIID:2181647 Length:788 Species:Mus musculus


Alignment Length:488 Identity:106/488 - (21%)
Similarity:186/488 - (38%) Gaps:128/488 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 QSEELKHLPDFSGLL---------SLTYLSVQTGALQELPSHLFRHLPKLQHIHITGGSGLTRLE 200
            |::.|.|:.|.|.||         .|..::|......:.....|:|...:  |:|.....|..|:
Mouse    79 QADVLGHILDRSFLLKHHSARKPSDLCTINVSGMKFSKAKEKDFKHFTSV--IYINASENLLPLD 141

  Fly   201 AGLFDGLISLKNLDLSHNGLNWIHLRALSRLPNLVSLKLSHNQ-----ISDVGMVGRIVKDLEHL 260
              :|.....||.|:|:.||:..:::: ......|..|.||.|.     |.|:|:       |.||
Mouse   142 --VFHTFPVLKELELAFNGIKMVYVK-YGDFKTLEFLDLSFNSLTEEAICDLGI-------LPHL 196

  Fly   261 KKLRLDNNLITVI--------EDGSFVDL---------PNLSELHLNDNRITELQ-YGAFLRTPQ 307
            :.|.|..|.:|.:        ::.|...|         |.|..|.|:||:::... :.:.....:
Mouse   197 RVLLLTGNGLTSLPPNMAVKEQEASMTSLTSKKYILRFPALETLMLDDNKLSNPSCFASLAGLRR 261

  Fly   308 LKTIYL-QNNLIRRIHPESLLQASGSGVEAVHMYNNEIGHVEALRALL------DALPRLRYLDM 365
            ||.:.| ||.::|..:.:.:....|||.......|.:    :.|:..:      |..|....|.|
Mouse   262 LKKLSLDQNKIVRIPYLQQIQLRDGSGDWVTEGPNPQ----KELQPQMWIFETPDEQPNYTVLPM 322

  Fly   366 SGNL-LSELPYGALRGHGTLEQLHLNHNHLRLIERDALMAMPALRELRMRNNSLSSDLPLPFWNL 429
            ..:: .:|:.:.:..|..|.|.       .::.....:..:..::.|:.||.:|:.    ||   
Mouse   323 KKDVDRTEVVFSSYPGFSTSET-------AKVCSLPPMFEILPVKSLKARNQTLAP----PF--- 373

  Fly   430 PGLKGLDLAQNQFARVDSQLLAGL-PSLRRLDLSENGLIELAPNSFRHNPLLETLNISSNELTKI 493
            |.|:.|.||.|:.|:.|:.|.|.| |||..|             .|.:|||:            .
Mouse   374 PELRYLSLAYNKIAKEDAVLPAALFPSLCEL-------------VFHNNPLV------------A 413

  Fly   494 HSSTLIHLERLFEVDASYNQLKSVIAGLPRIVERISLKGNQITSLPAAASKDLQLPNLRMLDLSQ 558
            |:..:..|.:.|..|.         .|: |:|.:..:|......:|...|:.:           :
Mouse   414 HTRGIPPLLKSFLQDR---------LGI-RLVRKKLVKPKHHMLMPRKESRKV-----------K 457

  Fly   559 NRIEQLPRHGFQGAMELRVLSLAQNELRQLKDT 591
            ..|.::|:|           ||..:.|..:.|:
Mouse   458 TYIPKVPKH-----------SLVPHHLNMITDS 479

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380
PCC 891..>936 CDD:188093
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914 96/425 (23%)
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380 7/23 (30%)
leucine-rich repeat 161..184 CDD:275380 4/22 (18%)
leucine-rich repeat 185..209 CDD:275380 5/23 (22%)
leucine-rich repeat 210..233 CDD:275380 6/22 (27%)
leucine-rich repeat 234..259 CDD:275380 9/29 (31%)
leucine-rich repeat 260..283 CDD:275380 7/39 (18%)
leucine-rich repeat 284..307 CDD:275380 5/23 (22%)
leucine-rich repeat 308..359 CDD:275380 12/57 (21%)
leucine-rich repeat 334..348 CDD:275378 1/13 (8%)
PLN00113 359..>824 CDD:215061 48/235 (20%)
leucine-rich repeat 360..383 CDD:275380 4/23 (17%)
leucine-rich repeat 384..407 CDD:275380 1/22 (5%)
leucine-rich repeat 408..431 CDD:275380 6/22 (27%)
leucine-rich repeat 432..455 CDD:275380 10/23 (43%)
leucine-rich repeat 456..476 CDD:275380 3/19 (16%)
leucine-rich repeat 480..501 CDD:275380 1/20 (5%)
leucine-rich repeat 505..517 CDD:275378 2/11 (18%)
leucine-rich repeat 525..550 CDD:275380 4/24 (17%)
leucine-rich repeat 551..574 CDD:275380 3/22 (14%)
leucine-rich repeat 575..598 CDD:275380 4/17 (24%)
leucine-rich repeat 599..622 CDD:275380
leucine-rich repeat 623..646 CDD:275380
leucine-rich repeat 647..670 CDD:275380
leucine-rich repeat 671..693 CDD:275380
leucine-rich repeat 694..717 CDD:275380
leucine-rich repeat 718..741 CDD:275380
leucine-rich repeat 742..763 CDD:275380
leucine-rich repeat 766..789 CDD:275380
leucine-rich repeat 790..813 CDD:275380
leucine-rich repeat 814..835 CDD:275380
leucine-rich repeat 838..861 CDD:275380
leucine-rich repeat 862..885 CDD:275380
Xrra1XP_017177834.1 LRR <120..>280 CDD:443914 42/171 (25%)
leucine-rich repeat 149..171 CDD:275378 6/22 (27%)
leucine-rich repeat 172..195 CDD:275378 9/29 (31%)
leucine-rich repeat 196..227 CDD:275378 7/30 (23%)
leucine-rich repeat 237..261 CDD:275378 5/23 (22%)
PRK15370 <239..>423 CDD:185268 50/226 (22%)
leucine-rich repeat 262..275 CDD:275378 5/12 (42%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.