DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and nrros

DIOPT Version :9

Sequence 1:NP_001262113.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_001003775.1 Gene:nrros / 445318 ZFINID:ZDB-GENE-040808-36 Length:685 Species:Danio rerio


Alignment Length:687 Identity:158/687 - (22%)
Similarity:265/687 - (38%) Gaps:168/687 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 ITVIEDGSFVDLPN-LSELHLNDNRITELQYGAFLRTPQLKTIYLQNNLIRRIHPESLLQASGSG 333
            ::||.|    .||: ..|:..:.|.:..||.| ..|.|.|:.....||.:..:...:.:::  ..
Zfish    48 LSVIPD----CLPHETEEIFFDRNLLENLQDG-LSRYPFLRMFSCANNQLMTVAETAFIES--HL 105

  Fly   334 VEAVHMYNNEI--GHVEALRALLDALPRLRYLDMSGNLLSELPYGALRGHGTLEQLHLNHNHLRL 396
            :|.:::.|||:  ||.:..:| ..:|.:|:.||:|||.|||                        
Zfish   106 LENLNLANNELHHGHKQVAQA-FRSLTQLKTLDLSGNGLSE------------------------ 145

  Fly   397 IERDALMAMPALRELRMRNNSLSSDLPLPFWNLPGLKGLDLAQNQFARVDSQLLAGLPSLRRLDL 461
               |.:..:.|                    ||..|:.|.|::|...|:|......|..|:.|::
Zfish   146 ---DMVSVLVA--------------------NLSSLESLYLSRNGMQRLDESTFRDLHQLKELNV 187

  Fly   462 SENGLIELAPNSFRHNPLLETLNISSNELTKIHSSTLIHLE--RLFEVDASYNQLKSVIAGLPRI 524
            ..|.|.|:: .:|.|...|:.||::.|.|     ..|::.|  :|..::||:|.::..|......
Zfish   188 ERNLLFEIS-GAFDHMKKLQRLNLAFNCL-----PCLVNFEMTQLLVLNASHNSIEWFITNQNLT 246

  Fly   525 ----VERISLKGNQITSLPAAASKDLQLPNLRMLDLSQNRIEQLPRHGF----------QGAMEL 575
                :|.:.|..|.:...|...:.:    .:|.|.||.||:      ||          .....:
Zfish   247 ETFQLETLDLSDNHLLFFPFLPTNN----QIRTLLLSNNRV------GFYQHLANSTSSNWTTSV 301

  Fly   576 RVLSLAQNELRQLKDTSFIGIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLEAITDNF 640
            ...:|.||            |..:.:....||..|.        |:.:..|:|..||:......|
Zfish   302 DYYNLGQN------------ISNITMDLWNENLHGN--------LSSVEFLDLSENKVNYFPQGF 346

  Fly   641 FSNNSRLEQLDLSRNLIRSISPTAFDTQRSLEYLDLSGNALLDI---SVGLGNLNNLRDIDLSYN 702
            .....:|..|.|..|.::|.|.|:.|...::..||:|.|.|.:|   ......||||..::||.|
Zfish   347 IKQMPQLYWLKLRSNCLQSFSLTSEDLPVTIYELDVSRNRLTEIKASQTSKNKLNNLTHLNLSTN 411

  Fly   703 QISRIQSDVIGGWRNVVEIRLSNNLIVELQQGTFRNLPKLQYLDLSSNEIRNVEPGALKGLDELQ 767
            .:......:                        |.:||.|..||||.|.:.........||....
Zfish   412 DLQNFPPMI------------------------FTSLPNLNTLDLSHNTVDVCYSSNYMGLSGCV 452

  Fly   768 EF-VLADNKLVELKDHVFEELPSLLASHFQYNKLRYISPESFHNANSLVFLNLSNNHFRNMENIG 831
            |: .:|..|.:.|.|...:.:||                 |.....||..|.||||...:::...
Zfish   453 EWSSMASLKQLYLADCSIQNVPS-----------------SAFKGTSLTHLELSNNPNLHLKQQS 500

  Fly   832 LRSMRN-LEVLDLSTNGVKLVSTMP---LKALNWLVELKMDNNQICRIQGSPFETMPRLRVLSMR 892
            |:.:.| |:.|.:...|::.....|   ||:||      :..|.:.::..|....  .|::|.:|
Zfish   501 LKGLANTLQHLGIGNTGLQDFDFSPYTNLKSLN------ISRNSLSKLPDSLMAL--NLKLLDLR 557

  Fly   893 NNQLRSIKERTFRNVRGNIAILDVDGNPIDCNCEMQW 929
            :|.|.:||......:...:..:.::||..:| |.:.|
Zfish   558 DNSLTTIKSEHASLLAKKLQTVYMNGNAFNC-CHLDW 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_001262113.1 leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
LRR_8 183..244 CDD:290566
leucine-rich repeat 185..209 CDD:275380
LRR_4 209..247 CDD:289563
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..259 CDD:275380
LRR_RI 250..492 CDD:238064 55/224 (25%)
LRR_8 259..318 CDD:290566 15/48 (31%)
leucine-rich repeat 260..283 CDD:275380 4/12 (33%)
leucine-rich repeat 284..307 CDD:275380 6/22 (27%)
leucine-rich repeat 308..359 CDD:275380 11/52 (21%)
leucine-rich repeat 334..348 CDD:275378 6/15 (40%)
LRR_8 358..418 CDD:290566 11/59 (19%)
leucine-rich repeat 360..383 CDD:275380 9/22 (41%)
leucine-rich repeat 384..407 CDD:275380 1/22 (5%)
LRR_8 406..466 CDD:290566 13/59 (22%)
leucine-rich repeat 408..431 CDD:275380 2/22 (9%)
leucine-rich repeat 432..455 CDD:275380 7/22 (32%)
LRR_RI 447..705 CDD:238064 66/276 (24%)
LRR_8 454..514 CDD:290566 18/61 (30%)
leucine-rich repeat 456..476 CDD:275380 6/19 (32%)
leucine-rich repeat 480..501 CDD:275380 6/20 (30%)
leucine-rich repeat 505..517 CDD:275378 3/11 (27%)
leucine-rich repeat 525..550 CDD:275380 4/24 (17%)
LRR_8 549..609 CDD:290566 14/69 (20%)
leucine-rich repeat 551..574 CDD:275380 8/32 (25%)
leucine-rich repeat 575..598 CDD:275380 4/22 (18%)
leucine-rich repeat 599..622 CDD:275380 4/22 (18%)
LRR_8 622..681 CDD:290566 17/58 (29%)
leucine-rich repeat 623..646 CDD:275380 5/22 (23%)
LRR_RI 647..896 CDD:238064 63/256 (25%)
leucine-rich repeat 647..670 CDD:275380 8/22 (36%)
leucine-rich repeat 671..693 CDD:275380 7/24 (29%)
leucine-rich repeat 694..717 CDD:275380 4/22 (18%)
LRR_8 716..776 CDD:290566 13/60 (22%)
leucine-rich repeat 718..741 CDD:275380 2/22 (9%)
leucine-rich repeat 742..763 CDD:275380 6/20 (30%)
LRR_8 765..824 CDD:290566 15/59 (25%)
leucine-rich repeat 766..789 CDD:275380 5/23 (22%)
leucine-rich repeat 790..813 CDD:275380 1/22 (5%)
leucine-rich repeat 814..835 CDD:275380 7/20 (35%)
leucine-rich repeat 838..861 CDD:275380 7/25 (28%)
LRR_8 862..921 CDD:290566 11/58 (19%)
leucine-rich repeat 862..885 CDD:275380 2/22 (9%)
leucine-rich repeat 886..906 CDD:275380 7/19 (37%)
TPKR_C2 919..>946 CDD:301599 4/11 (36%)
nrrosNP_001003775.1 LRR 1. /evidence=ECO:0000255 57..79 5/22 (23%)
LRR 2. /evidence=ECO:0000255 80..102 4/21 (19%)
LRR 3. /evidence=ECO:0000255 103..129 7/28 (25%)
LRR_RI <123..363 CDD:238064 70/323 (22%)
LRR 4. /evidence=ECO:0000255 130..154 12/70 (17%)
leucine-rich repeat 133..181 CDD:275380 20/94 (21%)
LRR 5. /evidence=ECO:0000255 155..178 7/22 (32%)
LRR 6. /evidence=ECO:0000255 180..201 6/21 (29%)
LRR_8 181..236 CDD:290566 18/60 (30%)
leucine-rich repeat 182..204 CDD:275380 7/22 (32%)
LRR 7. /evidence=ECO:0000255 202..225 7/27 (26%)
leucine-rich repeat 205..250 CDD:275380 12/49 (24%)
LRR 8. /evidence=ECO:0000255 248..271 4/22 (18%)
leucine-rich repeat 251..272 CDD:275380 4/24 (17%)
leucine-rich repeat 273..300 CDD:275380 8/32 (25%)
LRR 9. /evidence=ECO:0000255 273..296 8/28 (29%)
leucine-rich repeat 301..324 CDD:275380 6/34 (18%)
LRR 10. /evidence=ECO:0000255 326..349 6/22 (27%)
leucine-rich repeat 332..352 CDD:275380 5/19 (26%)
LRR 11. /evidence=ECO:0000255 351..373 7/21 (33%)
LRR 12. /evidence=ECO:0000255 374..397 6/22 (27%)
leucine-rich repeat 377..402 CDD:275380 7/24 (29%)
LRR_8 378..435 CDD:290566 21/80 (26%)
LRR_RI 379..>584 CDD:238064 58/253 (23%)
LRR 13. /evidence=ECO:0000255 400..423 8/46 (17%)
leucine-rich repeat 403..426 CDD:275380 6/46 (13%)
LRR 14. /evidence=ECO:0000255 425..447 7/21 (33%)
leucine-rich repeat 427..459 CDD:275380 9/31 (29%)
LRR 15. /evidence=ECO:0000255 457..480 7/39 (18%)
LRR_8 459..518 CDD:290566 17/75 (23%)
leucine-rich repeat 460..482 CDD:275380 6/38 (16%)
LRR 16. /evidence=ECO:0000255 482..503 8/20 (40%)
leucine-rich repeat 483..506 CDD:275380 7/22 (32%)
LRR 17. /evidence=ECO:0000255 505..526 4/20 (20%)
leucine-rich repeat 508..528 CDD:275380 4/19 (21%)
LRR_8 527..584 CDD:290566 13/64 (20%)
LRR 18. /evidence=ECO:0000255 527..549 6/27 (22%)
leucine-rich repeat 529..550 CDD:275380 6/28 (21%)
LRR 19. /evidence=ECO:0000255 551..571 7/19 (37%)
LRR 20. /evidence=ECO:0000255 573..596 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138601at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.