DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and Tollo

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_524757.1 Gene:Tollo / 44497 FlyBaseID:FBgn0029114 Length:1346 Species:Drosophila melanogaster


Alignment Length:1544 Identity:321/1544 - (20%)
Similarity:548/1544 - (35%) Gaps:464/1544 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 NELENGLVEIFVVEPQ----LR-----------SIPAESLNGMINMLAITIQSEELKHLPDFSGL 158
            :||||  ....|::||    ||           |:..:|...::.:..:||:..:|.:|.|    
  Fly    57 SELEN--TNFSVIQPQNTVRLRLECNDALFFQSSLSPDSFRSLVELRDLTIEYCKLGNLTD---- 115

  Fly   159 LSLTYLSVQTGALQELPSHLFRHLPKLQHIHITGGSGLTRLEAGLFDGLISLKNLDL-SHNGLNW 222
                                                       |.|.||..|:||.: :||| :|
  Fly   116 -------------------------------------------GSFRGLQELRNLTIRTHNG-DW 136

  Fly   223 IHLRALSRLPNLVSLKLSHNQISDVGMVGRIVKDLEHLKKLRLDNNLITVIEDGSFVDLPNLSEL 287
                      :.:||:::.|..          .:...|::|.|..|.|.:|.||....|.:|..|
  Fly   137 ----------STMSLEMASNSF----------VEFRQLERLDLSLNNIWLIPDGMVCPLKSLQHL 181

  Fly   288 HLNDNRITELQYGAFLRTPQLKTIYLQNNLIRRIHPESLLQASGSGVEAVHMYNNEIGHVEALRA 352
            :.:.|:|.:           :...|...:|..|     ..:..||.::::.:..|::  |....|
  Fly   182 NASYNKIQD-----------ISNFYFSASLSSR-----KARVCGSTLQSLDLSANKM--VSLPTA 228

  Fly   353 LLDALPRLRYLDMSGNLLSELPYGALRGHGTLEQLHLNHNHLRLIERDALMAMPALRELRMRNNS 417
            :|.||.||.:|:|:.|.:|.|...|..|..:|..:.|:.|.|..:..:.......|:|:.:||||
  Fly   229 MLSALGRLTHLNMAKNSMSFLADRAFEGLLSLRVVDLSANRLTSLPPELFAETKQLQEIYLRNNS 293

  Fly   418 LSSDLPLPFWNLPGLKGLDLAQNQFAR--VDSQLLAGLPSLRRLDLSENGLIELAPNSFRHNPLL 480
            ::...|..|..|..|..||||.|:...  :::....||..|..||||.|.:..|..:.||....|
  Fly   294 INVLAPGIFGELAELLVLDLASNELNSQWINAATFVGLKRLMMLDLSANKISRLEAHIFRPLASL 358

  Fly   481 ETLNISSNELTKIHSSTLIHLERLFEVDASYNQLKSV----IAGLPRIVERISLKGNQITSLPAA 541
            :.|.:..|.:.::.......|..|..:..|.|::..:    :.||..::. :||..|:|:.:...
  Fly   359 QILKLEDNYIDQLPGGIFADLTNLHTLILSRNRISVIEQRTLQGLKNLLV-LSLDFNRISRMDQR 422

  Fly   542 ASKDLQLPNLRMLDLSQNRIEQLPRHGFQGAMELRVLSLAQNELRQLKDTSFIGIQRLELLHLQE 606
            :.  :....|:.|.|:.|:::.:| ........|:.|.:.:|.:.|:::||...::.|..|.:.|
  Fly   423 SL--VNCSQLQDLHLNDNKLQAVP-EALAHVQLLKTLDVGENMISQIENTSITQLESLYGLRMTE 484

  Fly   607 NQLGEADERALLPLAELRNLNLQSNKLEAITDNFFSNNSRLEQLDLSRNLIRSISPTAFDTQRSL 671
            |.|..........::.|:.|||..|||::|.......||:|:.:.|..|.::||: ..|....:|
  Fly   485 NSLTHIRRGVFDRMSSLQILNLSQNKLKSIEAGSLQRNSQLQAIRLDGNQLKSIA-GLFTELPNL 548

  Fly   672 EYLDLSGNAL--------------LDISVG----LGNL------NNLRDIDLSYNQISRIQSDVI 712
            .:|::|||.|              ||:...    |||.      .:|...|.|||.::.|.:..|
  Fly   549 VWLNISGNRLEKFDYSHIPIGLQWLDVRANRITQLGNYFEIESELSLSTFDASYNLLTEITASSI 613

  Fly   713 GGWRNVVEI-RLSNNLIVELQQGTFRNLPKLQYLDLSSNEIRNVEPGALK----GLD-ELQEFVL 771
               .|.||: .|::|.|.::|..||...|.|..:||..|.:..:||.||:    ..| |:.||.:
  Fly   614 ---PNSVEVLYLNDNQISKIQPYTFFKKPNLTRVDLVRNRLTTLEPNALRLSPIAEDREIPEFYI 675

  Fly   772 ADN-------------------------------------------KLVELKDHVFEELPSLLAS 793
            ..|                                           .|:|.|.   ::.....||
  Fly   676 GHNAYECDCNLDWLQKVNRESRTQPQLMDLDQIHCRLAYARGSSHVSLIEAKS---DDFLCKYAS 737

  Fly   794 H---------FQYNKLRYISPE---SFHNAN-----------------------SLVFLNLSNNH 823
            |         ||....:...|:   .:|:.:                       ....|.|..|:
  Fly   738 HCFALCHCCDFQACDCKMECPDRCSCYHDQSWTSNVVDCSRASYEQTLPSHIPMDSTQLYLDGNN 802

  Fly   824 FRNMENIGLRSMRNLEVLDLSTNGVKLVSTMPLKALNWLVELKMDNNQICRIQGSPFETMPRLRV 888
            ||.:::......:.|:||.|:.:.::::.......|..|..|::.:||:..:.|:.|:.:..|:.
  Fly   803 FRELQSHAFIGRKRLKVLHLNHSRIEVLHNRTFYGLLELEVLQLQSNQLKALNGNEFQGLDNLQE 867

  Fly   889 LSMRNNQLRSIKERTFRNVRGNIAILDVDGNPIDCNCEMQWLSVWLQETNF---PYPGPKCQDGR 950
            |.:::|.:.:|...||.::. ::.||.:|.|.|.......:|..:|.|...   |:. ..|:...
  Fly   868 LYLQHNAIATIDTLTFTHLY-HLKILRLDHNAITSFAVWNFLPSYLNELRLASNPWT-CSCEFID 930

  Fly   951 LLRSARMERSLCVGADIYGNERTDGNQLPLLNEHGDVFQRDLPDDFNDECE-------------- 1001
            .||.                         .:|.|..|.     |....:|:              
  Fly   931 KLRD-------------------------YINRHEYVV-----DKLKMKCDVISGNSTQQMVIYP 965

  Fly  1002 -AGEGTRLP-----GDRPLVGESEYFYDQYVDATEAPDTTHSAISTSQRPKPTPTINSNIDLNNT 1060
             :||...||     ...||..::.:.|.:......|.:.|.:.:..:|.||        :|....
  Fly   966 GSGEPASLPVVQCSQTLPLGLDNNFNYAEQAGGENASNATSTKMILNQPPK--------LDYIPI 1022

  Fly  1061 ILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRFFGFGDRGRKQRTDSNDDMPA-THRMAHISLP 1124
            ::              :..|.|.:.:..:||...|             ..:|.. .|....:.| 
  Fly  1023 LV--------------AILTAFIFVMICISLVFIF-------------RQEMRVWCHSRFGVRL- 1059

  Fly  1125 SGRGKTRMYQPNSAEFEKYLKDQQKQEKLNIARNRYVDTDSTTSSMEDALSNESGSAATTVGVFR 1189
                           |....||..|.|     |.:..|...:.||.::...||..:         
  Fly  1060 ---------------FYNAQKDVDKNE-----REKLFDAFVSYSSKDELFVNEELA--------- 1095

  Fly  1190 TTFREPSSIERGGFRPIVPAH-----VGGFMPVHDPQQRRGLVEVVNITGNPSEIVQGI-GQRKF 1248
                  ..:|.|..|..:..|     |||::                    |..|||.| ..|:.
  Fly  1096 ------PMLEMGEHRYKLCLHQRDFPVGGYL--------------------PETIVQAIDSSRRT 1134

  Fly  1249 IPISTQARPKPTKSSGESSETATYEV-------------------------TETTPD----ITTT 1284
            |.:.::...|        ||...:|.                         .|..||    :.|.
  Fly  1135 IMVVSENFIK--------SEWCRFEFKSAHQSVLRDRRRRLIVIVLGEVPQKELDPDLRLYLKTN 1191

  Fly  1285 TPLM-------QRIATSTTKASTTTTRSTTTTSTTQVTPAENNASSSTELDSQYDDEDLEAQSVT 1342
            |.|.       |::..:....| ::.||.....:..| |. |:|       |.:....:..|::.
  Fly  1192 TYLQWGDKLFWQKLRFALPDVS-SSQRSNVAGQSCHV-PI-NHA-------SYHHHHHVHQQAMP 1246

  Fly  1343 L-----------LRPPPLVQTTTAETILLIPPAEEHVAQIKSRSWVTTTTPQSPSDNQVTLAGPT 1396
            |           :.|||..|..:......:...::...||:..:   .||.|........|.|..
  Fly  1247 LPHSVHHHQQQFMLPPPPQQPGSFRRQPSLHQQQQQQQQIRGNN---NTTQQQQQQQAALLMGGG 1308

  Fly  1397 STVPPPPPASPPLRGGGRSTITKVYTPYQQQVAQPTAEEYQRTTPSGDN 1445
            | |..|.|...||.||.:          ||.:..|   ..|:.||:..|
  Fly  1309 S-VGGPAPQMIPLAGGIQ----------QQSLPLP---PNQQPTPASRN 1343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380 6/19 (32%)
PCC 891..>936 CDD:188093 11/44 (25%)
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380 2/3 (67%)
LRR 93..530 CDD:443914 102/442 (23%)
leucine-rich repeat 115..138 CDD:275380 7/37 (19%)
leucine-rich repeat 139..160 CDD:275380 5/20 (25%)
leucine-rich repeat 161..184 CDD:275380 0/22 (0%)
leucine-rich repeat 185..209 CDD:275380 4/23 (17%)
leucine-rich repeat 210..233 CDD:275380 7/23 (30%)
leucine-rich repeat 234..259 CDD:275380 3/24 (13%)
leucine-rich repeat 260..283 CDD:275380 9/22 (41%)
leucine-rich repeat 284..307 CDD:275380 4/22 (18%)
leucine-rich repeat 308..359 CDD:275380 11/50 (22%)
leucine-rich repeat 334..348 CDD:275378 1/13 (8%)
PLN00113 359..>824 CDD:215061 138/578 (24%)
leucine-rich repeat 360..383 CDD:275380 8/22 (36%)
leucine-rich repeat 384..407 CDD:275380 4/22 (18%)
leucine-rich repeat 408..431 CDD:275380 9/22 (41%)
leucine-rich repeat 432..455 CDD:275380 8/24 (33%)
leucine-rich repeat 456..476 CDD:275380 8/19 (42%)
leucine-rich repeat 480..501 CDD:275380 3/20 (15%)
leucine-rich repeat 505..517 CDD:275378 2/11 (18%)
leucine-rich repeat 525..550 CDD:275380 4/24 (17%)
leucine-rich repeat 551..574 CDD:275380 5/22 (23%)
leucine-rich repeat 575..598 CDD:275380 6/22 (27%)
leucine-rich repeat 599..622 CDD:275380 5/22 (23%)
leucine-rich repeat 623..646 CDD:275380 9/22 (41%)
leucine-rich repeat 647..670 CDD:275380 6/22 (27%)
leucine-rich repeat 671..693 CDD:275380 11/45 (24%)
leucine-rich repeat 694..717 CDD:275380 7/22 (32%)
leucine-rich repeat 718..741 CDD:275380 8/23 (35%)
leucine-rich repeat 742..763 CDD:275380 8/24 (33%)
leucine-rich repeat 766..789 CDD:275380 6/65 (9%)
leucine-rich repeat 790..813 CDD:275380 7/57 (12%)
leucine-rich repeat 814..835 CDD:275380 5/20 (25%)
leucine-rich repeat 838..861 CDD:275380 5/22 (23%)
leucine-rich repeat 862..885 CDD:275380 6/22 (27%)
TolloNP_524757.1 LRR 54..400 CDD:443914 100/430 (23%)
leucine-rich repeat 100..123 CDD:275380 9/69 (13%)
leucine-rich repeat 124..144 CDD:275380 9/30 (30%)
leucine-rich repeat 154..177 CDD:275380 9/22 (41%)
leucine-rich repeat 178..201 CDD:275380 5/33 (15%)
leucine-rich repeat 212..235 CDD:275380 6/24 (25%)
leucine-rich repeat 236..259 CDD:275380 8/22 (36%)
LRR 239..634 CDD:443914 107/402 (27%)
leucine-rich repeat 260..283 CDD:275380 4/22 (18%)
leucine-rich repeat 284..307 CDD:275380 9/22 (41%)
leucine-rich repeat 308..333 CDD:275380 8/24 (33%)
leucine-rich repeat 334..357 CDD:275380 9/22 (41%)
leucine-rich repeat 358..381 CDD:275380 4/22 (18%)
leucine-rich repeat 382..405 CDD:275380 5/22 (23%)
leucine-rich repeat 406..429 CDD:275380 4/25 (16%)
leucine-rich repeat 430..452 CDD:275380 5/22 (23%)
leucine-rich repeat 453..500 CDD:275380 11/46 (24%)
leucine-rich repeat 501..521 CDD:275380 8/19 (42%)
leucine-rich repeat 525..547 CDD:275380 6/22 (27%)
leucine-rich repeat 548..573 CDD:275380 6/24 (25%)
leucine-rich repeat 604..640 CDD:275380 11/38 (29%)
LRR_8 616..>660 CDD:404697 16/43 (37%)
leucine-rich repeat 641..688 CDD:275380 13/46 (28%)
leucine-rich repeat 689..816 CDD:275380 15/129 (12%)
LRR <794..>920 CDD:443914 30/126 (24%)
leucine-rich repeat 817..864 CDD:275380 11/46 (24%)
leucine-rich repeat 865..888 CDD:275380 6/23 (26%)
leucine-rich repeat 889..910 CDD:275380 6/20 (30%)
TIR 1076..1211 CDD:214587 30/177 (17%)
Blue background indicates that the domain is not in the aligned region.

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