DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and chp

DIOPT Version :9

Sequence 1:NP_001262113.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_001263137.1 Gene:chp / 43690 FlyBaseID:FBgn0267435 Length:1338 Species:Drosophila melanogaster


Alignment Length:1364 Identity:324/1364 - (23%)
Similarity:543/1364 - (39%) Gaps:295/1364 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LPIFLLLCIGINLIRAE---------SCPPSQAILPCRCSLRGKEIQI-WCSHSNLPQIMDGLKA 58
            |.|.|::.|.::|.||.         ..||....:.|.||....::.| .|.:...|       |
  Fly    14 LTITLMIMIWMSLARASMFDREMEETHYPPCTYNVMCTCSKSSTDLGIVHCKNVPFP-------A 71

  Fly    59 VERNI-KGRIDELVLENNQLPALPGRFFGSLQIVRLMLRHNSIERVSNGWLNELENGLVEIFVVE 122
            :.|.: :.::..|.:||..|..:...|..|..:.||.:..|.:..:.:.....||..|.|:.:.:
  Fly    72 LPRMVNQSKVFMLHMENTGLREIEPYFLQSTGMYRLKISGNHLTEIPDDAFTGLERSLWELILPQ 136

  Fly   123 PQLRSIPAESLNGMINMLAITIQSEELKHL--PDFSGLL-SLTYLSVQTGALQELPSHLFRHLPK 184
            ..|..||::||..:..:..:.:....:.|:  ..|.||. ||..|.::...:.:|.||.|..|..
  Fly   137 NDLVEIPSKSLRHLQKLRHLDLGYNHITHIQHDSFRGLEDSLQTLILRENCISQLMSHSFSGLLI 201

  Fly   185 LQHIHITGGSGLTRLEAGLF-DGLISLKNLDLSHNGLNWIHLRALSRLPNLVSLKLSHNQISDVG 248
            |:.:.:: |:.|..::..:| ||:..|..|.|:.|.|:.|...||..|.:|.:|.:|||.|..:.
  Fly   202 LETLDLS-GNNLFEIDPNVFVDGMPRLTRLLLTDNILSEIPYDALGPLKSLRTLDISHNVIWSLS 265

  Fly   249 MVGRIVKDLEHLKKLRLDN-----NLITVIEDGSFVDLPNLSELHLNDNRITELQYGAFLRTPQL 308
              |....:::...||.|||     |.|.|:...||.....::....:.|.|..|:..|| :..::
  Fly   266 --GNETYEIKASTKLNLDNLHLEYNHIEVLPPNSFKYFDTVNRTFFDGNPIHTLREDAF-KPARI 327

  Fly   309 KTIYLQNNLIRRIHP---ESLLQASGSGVEAVHMYNNEIGHVEALRALLDALPRLRYLDMSGNLL 370
            :.||::...:..|.|   :||:.:                              |:.||:|||.|
  Fly   328 REIYMRYCGLTNISPVAFDSLVNS------------------------------LQILDLSGNNL 362

  Fly   371 SELPYGALRGHGTLEQLHLNHNHLRLIERDALMAMPALRELRMRNNSLSSDLPLPFWNLP--GLK 433
            ::|                   |.:|...     ...||.:.||:|.:....|...:|..  .|.
  Fly   363 TKL-------------------HHKLFNN-----FDVLRVISMRDNKIKIQKPTETFNAVHYTLL 403

  Fly   434 GLDLAQNQFARVDSQLLAGLPSLRRLDLSENGLIELAPNSFRHNPL-LETLNISSNELTKIHSST 497
            .|||:.::....:.|.|..:.::|.|.:|..|...:.|..|:...: ||.|.|:...|:.|.|..
  Fly   404 KLDLSGDRNDPTNLQTLRKMRNMRSLSISRLGSSSVGPEDFKDFGVELEDLQITRASLSGIQSHA 468

  Fly   498 LIHLERLFEVDASYNQLKSVIAGLPRIVER----------ISLK---GNQITSLPAAASKDLQ-- 547
            ..|:..|..:|.|.|.:.|        :|.          ||||   |...::|||...:.|.  
  Fly   469 FKHVRGLKRLDFSENGISS--------IENDAFHEIGHSLISLKMSHGYSGSALPAEPLRHLTSL 525

  Fly   548 --------------------LPNLRMLDLSQNRIEQLPRHGFQGAM--ELRVLSLAQNELRQLKD 590
                                |.|||:|:|..|||||:.:..|||.:  :|..:||..|.|..:..
  Fly   526 QELDFSNNHISSMSDTSFHFLKNLRLLELHDNRIEQVLKGTFQGDIHSKLEEISLRFNHLTSISQ 590

  Fly   591 TSFIGIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLEAITDNFFSNNSRLEQLDLSRN 655
            .:|..::.|..|||.:|::.:.:.||.:.|.||..|:|:.||:..:.|..|.|..:||.||::.|
  Fly   591 HTFFDLEALRKLHLDDNKIDKIERRAFMNLDELEYLSLRGNKINNLADESFQNLPKLEILDMAFN 655

  Fly   656 LIRSISPTAFDTQRSLEYL--DLSGNALLDISVGL--------GNL--NNLRDIDLSYNQISRIQ 708
            .:.:.:...||...:|..|  ::|.|.:..:....        |.:  :|::.:|||:|.||.|.
  Fly   656 QLPNFNFDYFDQVGTLSNLNVNVSHNQIRQLMYNSSWSGRNEHGGMYHSNIKILDLSHNNISIIH 720

  Fly   709 SDVIGGWRNVVEIRLSN-----NLIVELQQGTFRNLPKLQYLDLSSNEIRNVEPGALKGLDELQE 768
            .    |:....||.|::     |.::...:..|.|:|.||:||||.|.|..::..|.|...:||.
  Fly   721 P----GYFRPAEISLTHLHLGYNSLMNTTRDVFGNMPHLQWLDLSYNWIHELDFDAFKNTKQLQL 781

  Fly   769 FVLADNKLVELKDHVFEELPSLLASHFQYNKLRYISPESFHNANSLVFLNLSNNHFRNMENIGLR 833
            .....|.|.::...:|:.:..|....|.:|.||.:....|:| ..:..|::|:|....:.:..|.
  Fly   782 VFFGHNYLSDIPQDIFKPVQGLRIVDFSHNHLRGLPDNLFYN-GGMEKLDVSHNMMLKIPSSSLS 845

  Fly   834 SMRNLEV--LDLSTNGVKLVSTMPL----KALNWLVELKMDNNQICRIQGSPFETMPRLRVLSMR 892
            |:..|.:  |.||.|.:..:.:|.|    ::|.:   |.:..|.:.||..:.|.|||:|.||.:.
  Fly   846 SLAALTLCELHLSNNFISTIHSMDLSNKFRSLRY---LDISYNYLLRIDDAVFATMPKLAVLDLS 907

  Fly   893 NNQLRSIKERTFRNVRGNIAILDVDGNPIDCNCEMQWLSVWLQETNFPY---PGPKCQDGRLLRS 954
            :|:...:.:::|..:..::..|.::...:....|::  ..:|:|....|   |....:....:.:
  Fly   908 HNRDLKVMDKSFMGLENSLIKLGLENISLSTVPEIR--LKYLREFRLGYNELPSIPQELAHNMSN 970

  Fly   955 ARMERSLCVGADIYGNERTD-----------------GNQLPLLNEHG------DVFQRDLPDDF 996
            .||       .|:..|:.|:                 ||.:..||.:.      |:...|:.:..
  Fly   971 LRM-------LDLSNNDLTNVPLMTQALPHLRRLMLSGNPITSLNNNSFDGVNEDLEMLDISNFR 1028

  Fly   997 NDECEAGEGTRLPGDRPL----VGESEYF---------YDQYVDATEAPDT----------THSA 1038
            ....|.|....||..|.|    ....|:|         |:......|||..          ....
  Fly  1029 LHYFEYGCLDSLPHLRSLKLTAYSHLEHFNIPHLLRHHYNIRQLWIEAPQPFTRIVKKGSGPTQE 1093

  Fly  1039 ISTSQRPKPT----------PTINSNI--------DLNNTILHTKYFNRKPQPGSGSPFTF---F 1082
            :.|.|...||          |:..:||        :||..||.          |..||:.:   |
  Fly  1094 MQTLQLGNPTDLQREMEGHLPSKLTNITFSGPQFTNLNERILR----------GMRSPYLYMQLF 1148

  Fly  1083 GYPLPSVSLGRFFGFGDRGRKQRTDSNDDMPATHRMAHISLPSGRGKTRMYQPNSAEFEKYLKD- 1146
            ...|.::. ..||.:..|.|....|..     .|......:|:.......|.|||.    :|.| 
  Fly  1149 NTSLQALP-PNFFKYMGRVRNISLDIR-----YHNRNLKKIPNPNTGAVPYLPNSV----FLTDL 1203

  Fly  1147 QQKQEKLNI------------ARNRYVDTDSTTSSMEDALSNESGSAATTVGVFRTTFREPSSI 1198
            :.....||.            .|.:|:.:..|                .|..||||....|..:
  Fly  1204 KMSHTDLNCDCDLGWVEFWQRKRRQYICSSQT----------------WTDTVFRTFMNSPCQV 1251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_001262113.1 leucine-rich repeat 69..89 CDD:275380 6/19 (32%)
leucine-rich repeat 90..113 CDD:275380 4/22 (18%)
leucine-rich repeat 115..138 CDD:275380 7/22 (32%)
leucine-rich repeat 139..160 CDD:275380 4/23 (17%)
leucine-rich repeat 161..184 CDD:275380 7/22 (32%)
LRR_8 183..244 CDD:290566 20/61 (33%)
leucine-rich repeat 185..209 CDD:275380 6/24 (25%)
LRR_4 209..247 CDD:289563 15/37 (41%)
leucine-rich repeat 210..233 CDD:275380 9/22 (41%)
leucine-rich repeat 234..259 CDD:275380 7/24 (29%)
LRR_RI 250..492 CDD:238064 56/252 (22%)
LRR_8 259..318 CDD:290566 17/63 (27%)
leucine-rich repeat 260..283 CDD:275380 10/27 (37%)
leucine-rich repeat 284..307 CDD:275380 5/22 (23%)
leucine-rich repeat 308..359 CDD:275380 6/53 (11%)
leucine-rich repeat 334..348 CDD:275378 0/13 (0%)
LRR_8 358..418 CDD:290566 15/59 (25%)
leucine-rich repeat 360..383 CDD:275380 8/22 (36%)
leucine-rich repeat 384..407 CDD:275380 2/22 (9%)
LRR_8 406..466 CDD:290566 16/61 (26%)
leucine-rich repeat 408..431 CDD:275380 7/24 (29%)
leucine-rich repeat 432..455 CDD:275380 6/22 (27%)
LRR_RI 447..705 CDD:238064 85/307 (28%)
LRR_8 454..514 CDD:290566 18/60 (30%)
leucine-rich repeat 456..476 CDD:275380 6/19 (32%)
leucine-rich repeat 480..501 CDD:275380 7/20 (35%)
leucine-rich repeat 505..517 CDD:275378 3/11 (27%)
leucine-rich repeat 525..550 CDD:275380 11/59 (19%)
LRR_8 549..609 CDD:290566 24/61 (39%)
leucine-rich repeat 551..574 CDD:275380 12/24 (50%)
leucine-rich repeat 575..598 CDD:275380 6/22 (27%)
leucine-rich repeat 599..622 CDD:275380 8/22 (36%)
LRR_8 622..681 CDD:290566 20/60 (33%)
leucine-rich repeat 623..646 CDD:275380 8/22 (36%)
LRR_RI 647..896 CDD:238064 75/271 (28%)
leucine-rich repeat 647..670 CDD:275380 7/22 (32%)
leucine-rich repeat 671..693 CDD:275380 5/33 (15%)
leucine-rich repeat 694..717 CDD:275380 8/22 (36%)
LRR_8 716..776 CDD:290566 20/64 (31%)
leucine-rich repeat 718..741 CDD:275380 6/27 (22%)
leucine-rich repeat 742..763 CDD:275380 10/20 (50%)
LRR_8 765..824 CDD:290566 15/58 (26%)
leucine-rich repeat 766..789 CDD:275380 5/22 (23%)
leucine-rich repeat 790..813 CDD:275380 7/22 (32%)
leucine-rich repeat 814..835 CDD:275380 4/20 (20%)
leucine-rich repeat 838..861 CDD:275380 8/28 (29%)
LRR_8 862..921 CDD:290566 14/58 (24%)
leucine-rich repeat 862..885 CDD:275380 7/22 (32%)
leucine-rich repeat 886..906 CDD:275380 5/19 (26%)
TPKR_C2 919..>946 CDD:301599 5/29 (17%)
chpNP_001263137.1 leucine-rich repeat 84..103 CDD:275380 6/18 (33%)
LRR_8 102..163 CDD:290566 12/60 (20%)
leucine-rich repeat 104..128 CDD:275380 5/23 (22%)
LRR_RI <128..261 CDD:238064 39/133 (29%)
leucine-rich repeat 129..152 CDD:275380 7/22 (32%)
LRR_8 152..212 CDD:290566 14/60 (23%)
leucine-rich repeat 153..177 CDD:275380 4/23 (17%)
leucine-rich repeat 178..201 CDD:275380 7/22 (32%)
LRR_8 202..261 CDD:290566 20/59 (34%)
leucine-rich repeat 202..226 CDD:275380 6/24 (25%)
leucine-rich repeat 227..250 CDD:275380 9/22 (41%)
leucine-rich repeat 251..279 CDD:275380 8/29 (28%)
leucine-rich repeat 280..326 CDD:275380 13/46 (28%)
LRR_8 326..386 CDD:290566 21/113 (19%)
leucine-rich repeat 327..348 CDD:275380 4/20 (20%)
leucine-rich repeat 352..375 CDD:275380 10/46 (22%)
leucine-rich repeat 376..401 CDD:275380 7/24 (29%)
leucine-rich repeat 426..450 CDD:275378 6/23 (26%)
LRR_RI <448..651 CDD:238064 62/210 (30%)
leucine-rich repeat 451..474 CDD:275380 8/22 (36%)
LRR_8 473..559 CDD:290566 22/93 (24%)
leucine-rich repeat 475..524 CDD:275380 15/56 (27%)
leucine-rich repeat 500..519 CDD:275380 8/18 (44%)
leucine-rich repeat 525..548 CDD:275380 1/22 (5%)
leucine-rich repeat 549..574 CDD:275380 12/24 (50%)
LRR_8 573..633 CDD:290566 19/59 (32%)
leucine-rich repeat 575..598 CDD:275380 6/22 (27%)
leucine-rich repeat 599..622 CDD:275380 8/22 (36%)
LRR_8 622..683 CDD:290566 20/60 (33%)
leucine-rich repeat 623..646 CDD:275380 8/22 (36%)
leucine-rich repeat 647..730 CDD:275380 22/86 (26%)
leucine-rich repeat 648..673 CDD:275380 7/24 (29%)
leucine-rich repeat 674..705 CDD:275380 4/30 (13%)
LRR_8 704..763 CDD:290566 22/62 (35%)
leucine-rich repeat 731..754 CDD:275380 4/22 (18%)
LRR_8 753..813 CDD:290566 19/59 (32%)
leucine-rich repeat 755..778 CDD:275380 10/22 (45%)
leucine-rich repeat 779..802 CDD:275380 5/22 (23%)
leucine-rich repeat 803..823 CDD:275380 6/19 (32%)
leucine-rich repeat 852..876 CDD:275380 6/23 (26%)
LRR_8 854..910 CDD:290566 18/58 (31%)
LRR_RI <877..>1006 CDD:238064 27/140 (19%)
leucine-rich repeat 877..900 CDD:275380 8/25 (32%)
leucine-rich repeat 901..925 CDD:275380 5/23 (22%)
leucine-rich repeat 926..946 CDD:275380 2/21 (10%)
LRR_8 947..1004 CDD:290566 11/63 (17%)
leucine-rich repeat 947..970 CDD:275380 4/22 (18%)
leucine-rich repeat 971..993 CDD:275380 5/28 (18%)
LRR_8 992..1049 CDD:290566 12/56 (21%)
leucine-rich repeat 994..1014 CDD:275380 4/19 (21%)
leucine-rich repeat 1019..1042 CDD:275380 4/22 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42484
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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