DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and tlr22

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_001122147.2 Gene:tlr22 / 403135 ZFINID:ZDB-GENE-040220-5 Length:955 Species:Danio rerio


Alignment Length:913 Identity:230/913 - (25%)
Similarity:356/913 - (38%) Gaps:234/913 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 LSRLPNLV-SLKLSHN-----QISDVGMVGRIVKDLEHLKKLRLDNNLITVIEDGSFVDLPNLSE 286
            :.|:||.. .|.:|.|     ||.|:.:       |.:|:.|.:.||.|:.|:||:|..|.||::
Zfish    61 IPRVPNNTWILDISFNSFAQIQIEDLNI-------LLNLQYLNVSNNKISKIQDGAFGSLFNLTD 118

  Fly   287 LHLNDNRITELQYGAFLRTPQLKTIYLQNNLIRRIHPESLLQASGSGVEAVHMYNNEIGHVEALR 351
            |:|..||:..:..|.......|..:.|..|.|..| .||......| ::.:::..|.:.|::.::
Zfish   119 LNLASNRLNAVSNGMLRGLTNLLVLRLDRNYISVI-KESAFSTLHS-LQVLNLSKNHLRHIDDVK 181

  Fly   352 ALLDALPRLRYLDMSGNLLSELPYGALRGHGTLEQLHLNHNHLRLIERDALMAMPALRELRMRNN 416
            .:|.:|                         .||:|::..|:..:.                 |:
Zfish   182 PVLASL-------------------------YLEELYIGSNYFNVF-----------------NS 204

  Fly   417 SLSSDLPLPFWNLPGLKGLDLAQNQFARVDSQLLAGL-PSLRRLDLSENGLIELAPNSFRHNPLL 480
            |..|..||      .||.|||:.|:||..  ||...: |:|..||||..|          ||..:
Zfish   205 SELSTKPL------SLKRLDLSNNRFAAF--QLTNNIFPTLNHLDLSYCG----------HNGTM 251

  Fly   481 ETLNISSNELTKIHSSTLIHLERLF--EVDASYNQLKSVIAGLPRIVERISLKGN---QITSLPA 540
             ..|::       ..|.|..::.|:  :|:.|.....:|:......:.:|.|.||   ..|||..
Zfish   252 -AWNVT-------EKSYLASVKTLYFMDVNMSIQTADNVLQSFNNTLNKIRLNGNVRLNKTSLLL 308

  Fly   541 AASKDLQLPNLRMLDLSQNRIEQLPRHGFQGAMELRVLSLAQNELRQLKDTSFIGIQRLELLHLQ 605
            :...    |.||:|.|...:|:.|..|.|....||..|.|..||:..|..:.|.|.::|:.|.||
Zfish   309 SVCS----PMLRVLRLIATKIKHLTNHMFDPCSELSELDLGGNEISNLSQSMFRGFKQLKKLQLQ 369

  Fly   606 ENQLGEADERALLPLAELRNLNLQSNKLEAITDNFFSNNSRLEQLDLSRNLIRSISPTAFDTQRS 670
            .|:|........: |..|..::|..|.:..::.|.|:|.::::.|.|..|.|.||....|...:|
Zfish   370 INKLTRVTNSFQI-LTSLEFIDLSRNHIHKLSCNDFANLTQVKTLYLYSNKISSIRSCLFKDLKS 433

  Fly   671 LEYLDLSGNALLDI-------------------------SVGLGNLNNLRDIDLSYNQISRIQSD 710
            ||.|.|..|.||.|                         |...|||..|.::.|..||||.|:..
Zfish   434 LEVLRLGTNNLLKIDDVFSNGPYFLKELQLSYNKLSLIKSHTFGNLPQLNNLSLEDNQISEIEGY 498

  Fly   711 VIGGWRNVVEIRLSNNLI----VELQQGTFRNLPKLQYLDLSSNEIR----NVEPGALKGLDELQ 767
            ..||..|:..:.||:|.|    :......|..:|.||.|||.:|.|.    .::....|.|..|:
Zfish   499 AFGGLENLTSLFLSSNKITGKTLTTHPNVFSGMPNLQNLDLFANSISFAYDKLKYPLFKDLKNLR 563

  Fly   768 EFVLADNK--LVELKDHVFEELPSLLASHFQYNKLRYISPESFHNANSLVFLNLSNNHFRNMENI 830
            |..|...:  :.:|..::.|.|.||...:.....|..::|..|:....|.||:||.|..|..:.|
Zfish   564 ELSLYSQRRGIGQLPSNLLEGLSSLQMFYIGNTNLNQLNPNLFNFTPQLWFLDLSKNALREDDAI 628

  Fly   831 G---LRSMRNLEVLDLSTNGVKLVSTMPLKALNWLVELKMDNNQICRIQGSPFETMPRLRVLSMR 892
            .   ...:.||..|.:|...::.::.:....||.|..|:...|:|..:..:..:::|||.||.::
Zfish   629 PPELFHPIPNLTKLIISRTQLRSLNFLLGANLNKLSTLRASGNEIDSVNETLIKSLPRLAVLDLQ 693

  Fly   893 NNQLRSIKERTF------------------------RNVRG-NIAILDVDGNPIDCNCEMQW--- 929
            ||.........|                        |.:|| ::|..:.|      :|...|   
Zfish   694 NNTFTCDCNNAFFIDWAKKNESTQVYYLSRYTCSYPRTLRGTSLAEFNTD------SCTFNWDYI 752

  Fly   930 --------------LS-VWLQETNFPYPGPKCQDGRLLRSARMERSLCVGADIYGNERTDGNQLP 979
                          || :|    ||            ||...:.......|.:|.:.|       
Zfish   753 CFVCSSILVILTLLLSFIW----NF------------LRYQVVYTYYLFLAFLYDSRR------- 794

  Fly   980 LLNEHGDVFQRDLPDDFN--DEC----------EAGEGTRL--------PGDRPLVGESEYFYDQ 1024
              |:.|..||.|....:|  ||.          |..:|.||        || ||::       |.
Zfish   795 --NQSGQTFQYDAFISYNTLDEAWVMEELIPKLEGEQGWRLCLHHRDFEPG-RPII-------DN 849

  Fly  1025 YVD 1027
            .||
Zfish   850 IVD 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380 6/43 (14%)
PCC 891..>936 CDD:188093 13/87 (15%)
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914 75/310 (24%)
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
leucine-rich repeat 185..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380 1/4 (25%)
leucine-rich repeat 234..259 CDD:275380 7/30 (23%)
leucine-rich repeat 260..283 CDD:275380 10/22 (45%)
leucine-rich repeat 284..307 CDD:275380 6/22 (27%)
leucine-rich repeat 308..359 CDD:275380 12/50 (24%)
leucine-rich repeat 334..348 CDD:275378 2/13 (15%)
PLN00113 359..>824 CDD:215061 135/505 (27%)
leucine-rich repeat 360..383 CDD:275380 0/22 (0%)
leucine-rich repeat 384..407 CDD:275380 4/22 (18%)
leucine-rich repeat 408..431 CDD:275380 5/22 (23%)
leucine-rich repeat 432..455 CDD:275380 10/23 (43%)
leucine-rich repeat 456..476 CDD:275380 6/19 (32%)
leucine-rich repeat 480..501 CDD:275380 3/20 (15%)
leucine-rich repeat 505..517 CDD:275378 2/13 (15%)
leucine-rich repeat 525..550 CDD:275380 7/27 (26%)
leucine-rich repeat 551..574 CDD:275380 8/22 (36%)
leucine-rich repeat 575..598 CDD:275380 8/22 (36%)
leucine-rich repeat 599..622 CDD:275380 7/22 (32%)
leucine-rich repeat 623..646 CDD:275380 6/22 (27%)
leucine-rich repeat 647..670 CDD:275380 7/22 (32%)
leucine-rich repeat 671..693 CDD:275380 12/46 (26%)
leucine-rich repeat 694..717 CDD:275380 9/22 (41%)
leucine-rich repeat 718..741 CDD:275380 5/26 (19%)
leucine-rich repeat 742..763 CDD:275380 8/24 (33%)
leucine-rich repeat 766..789 CDD:275380 6/24 (25%)
leucine-rich repeat 790..813 CDD:275380 4/22 (18%)
leucine-rich repeat 814..835 CDD:275380 8/23 (35%)
leucine-rich repeat 838..861 CDD:275380 4/22 (18%)
leucine-rich repeat 862..885 CDD:275380 4/22 (18%)
tlr22NP_001122147.2 LRR <70..>242 CDD:443914 58/230 (25%)
leucine-rich repeat 71..91 CDD:275380 7/26 (27%)
leucine-rich repeat 92..115 CDD:275380 10/22 (45%)
leucine-rich repeat 116..139 CDD:275380 6/22 (27%)
leucine-rich repeat 140..163 CDD:275380 7/23 (30%)
leucine-rich repeat 164..213 CDD:275380 13/96 (14%)
leucine-rich repeat 214..338 CDD:275380 42/147 (29%)
LRR 283..698 CDD:443914 119/419 (28%)
leucine-rich repeat 339..362 CDD:275380 8/22 (36%)
leucine-rich repeat 363..385 CDD:275380 7/22 (32%)
leucine-rich repeat 386..409 CDD:275380 6/22 (27%)
leucine-rich repeat 410..433 CDD:275380 7/22 (32%)
leucine-rich repeat 434..457 CDD:275380 8/22 (36%)
leucine-rich repeat 458..481 CDD:275380 4/22 (18%)
leucine-rich repeat 482..505 CDD:275380 9/22 (41%)
leucine-rich repeat 506..533 CDD:275380 5/26 (19%)
leucine-rich repeat 534..561 CDD:275380 9/26 (35%)
leucine-rich repeat 562..587 CDD:275380 6/24 (25%)
leucine-rich repeat 588..606 CDD:275380 3/17 (18%)
leucine-rich repeat 612..638 CDD:275380 8/25 (32%)
leucine-rich repeat 639..662 CDD:275380 4/22 (18%)
leucine-rich repeat 663..686 CDD:275380 4/22 (18%)
PCC 669..>737 CDD:188093 13/67 (19%)
leucine-rich repeat 687..705 CDD:275380 5/17 (29%)
TIR 802..945 CDD:214587 16/59 (27%)
Blue background indicates that the domain is not in the aligned region.

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