DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and Toll-6

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_524081.1 Gene:Toll-6 / 39663 FlyBaseID:FBgn0036494 Length:1514 Species:Drosophila melanogaster


Alignment Length:913 Identity:229/913 - (25%)
Similarity:363/913 - (39%) Gaps:194/913 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 ALQELPSHLFRHLPKLQHIHITGGSGLTRLEAGLFDGLISLKNLDLSHNGLNWIHLRALSRLPNL 234
            |...|.:..|.||.:||.:.|. ...|.||...:.|||..|:||.|..:.:.|         |  
  Fly   133 AKSRLEAQSFAHLVRLQQLSIQ-YCKLGRLGRQVLDGLEQLRNLTLRTHNILW---------P-- 185

  Fly   235 VSLKLSHNQISDVGMVGRIVKDLEHLKKLRLDNNLITVIEDGSFVDLPNLSELHLNDNRITELQY 299
               .|:....:|...|.|      .|::|.|.:|.|..:.|..|..|..||.|::::||:.::..
  Fly   186 ---ALNFEIEADAFSVTR------RLERLDLSSNNIWSLPDNIFCTLSELSALNMSENRLQDVNE 241

  Fly   300 GAFLRTPQLKTIYLQNNLIRRIHPESLLQASGSGVEAVHMYNNEIGHVEALRALLDALPRLRYLD 364
            ..|..              |...|.:....|.|..|:....::     .:....||    |.|||
  Fly   242 LGFRD--------------RSKEPTNGSTESTSTTESAKKSSS-----SSTSCSLD----LEYLD 283

  Fly   365 MSGNLLSELPYGALRGHGTLEQLHLNHNHLRLIERDALMAMPALRELRMRNNSLSSDLPLPFWNL 429
            :|.|....||   ..|.|||.:                     ||.|.:.||.:|          
  Fly   284 VSHNDFVVLP---ANGFGTLRR---------------------LRVLSVNNNGIS---------- 314

  Fly   430 PGLKGLDLAQNQFARVDSQLLAGLPSLRRLDLSENGLIELAPNSFRHNPLLETLNISSNELTKIH 494
                          .:..:.|:||.:|:.|:||.|.::.|....|                    
  Fly   315 --------------MIADKALSGLKNLQILNLSSNKIVALPTELF-------------------- 345

  Fly   495 SSTLIHLERLFEVDASYNQLKSVIAGLPRIVERISLKGNQITSL-PAAASKDLQLPNLRMLDLSQ 558
                                    |...:|::.:.|:.|.|:.| |...|   .|..|:.||||.
  Fly   346 ------------------------AEQAKIIQEVYLQNNSISVLNPQLFS---NLDQLQALDLSM 383

  Fly   559 NRIEQ--LPRHGFQGAMELRVLSLAQNELRQLKDTSFIGIQRLELLHLQENQLGEADERALLPLA 621
            |:|..  :.::.|.|.:.|.:|:|:.|:|.:|:...|..:..|::|:|:.|||.........|:.
  Fly   384 NQITSTWIDKNTFVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMN 448

  Fly   622 ELRNLNLQSNKLEAITDNFFSNNSRLEQLDLSRNLIRSISPTAFDTQRSLEYLDLSGNALLDISV 686
            .|..|.|..|||:.:.....:....|..|.|..|.:..:.|.||....:|:.|:|:||.|..:.:
  Fly   449 NLHTLLLSHNKLKYLDAYALNGLYVLSLLSLDNNALIGVHPDAFRNCSALQDLNLNGNQLKTVPL 513

  Fly   687 GLGNLNNLRDIDLSYNQISRIQSDVIGGWRNVVEIRLSNNLIVELQQGTFRNLPKLQYLDLSSNE 751
            .|.|:.:||.:||..|.|:.::.....|..|:..:||..|.:..:...|||:||.||.|:|:.|.
  Fly   514 ALRNMRHLRTVDLGENMITVMEDSAFKGLGNLYGLRLIGNYLENITMHTFRDLPNLQILNLARNR 578

  Fly   752 IRNVEPGALKGLDELQEFVLADNKLVELKDHVFEELPSLLASHFQYNKLRYISPESF---HNANS 813
            |..|||||.:....:|...|..|:|.:: :.:|..:||||..:...|:|     |||   |..::
  Fly   579 IAVVEPGAFEMTSSIQAVRLDGNELNDI-NGLFSNMPSLLWLNISDNRL-----ESFDYGHVPST 637

  Fly   814 LVFLNLSNNHFRNMEN-IGLRSMRNLEVLDLSTNGVKLV--STMPLKALNWLVELKMDNNQICRI 875
            |.:|:|..|...::.| .||.|...|:.||:|.|.::.:  |::|    |.:..|.:::|.|..:
  Fly   638 LQWLDLHKNRLSSLSNRFGLDSELKLQTLDVSFNQLQRIGPSSIP----NSIELLFLNDNLITTV 698

  Fly   876 QGSPFETMPRLRVLSMRNNQLRSIKERTFRNVRGNIAILDV-----------DGNPIDCNCEMQW 929
            ....|.....|..:.:..||:.::..::.|       ||.|           .|||..|:|.:.|
  Fly   699 DPDTFMHKTNLTRVDLYANQITTLDIKSLR-------ILPVWEHRALPEFYIGGNPFTCDCNIDW 756

  Fly   930 LSVWLQETNFPYPGPKCQDGRLLRSARMERSLCVGADIYGN-ERTDGNQLPLLNEHGDVFQRDLP 993
            |......|:..||          |...:|...|   .:..| ||.   .:||:......|.....
  Fly   757 LQKINHITSRQYP----------RIMDLETIYC---KLLNNRERA---YIPLIEAEPKHFLCTYK 805

  Fly   994 DDFNDECEAGEGTRLPGDRPLVGESEYFYDQYVDATEAPDTTHSAISTSQRPKPTPTINSNIDLN 1058
            ......|...|......:.........|:|| ..:|...:.:.:|.|...|..|..|....||.|
  Fly   806 THCFAVCHCCEFDACDCEMTCPTNCTCFHDQ-TWSTNIVECSGAAYSEMPRRVPMDTSELYIDGN 869

  Fly  1059 NTI 1061
            |.:
  Fly   870 NFV 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380 3/19 (16%)
PCC 891..>936 CDD:188093 13/55 (24%)
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914 75/359 (21%)
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380 5/13 (38%)
leucine-rich repeat 185..209 CDD:275380 9/23 (39%)
leucine-rich repeat 210..233 CDD:275380 5/22 (23%)
leucine-rich repeat 234..259 CDD:275380 4/24 (17%)
leucine-rich repeat 260..283 CDD:275380 8/22 (36%)
leucine-rich repeat 284..307 CDD:275380 6/22 (27%)
leucine-rich repeat 308..359 CDD:275380 7/50 (14%)
leucine-rich repeat 334..348 CDD:275378 1/13 (8%)
PLN00113 359..>824 CDD:215061 127/470 (27%)
leucine-rich repeat 360..383 CDD:275380 9/22 (41%)
leucine-rich repeat 384..407 CDD:275380 1/22 (5%)
leucine-rich repeat 408..431 CDD:275380 6/22 (27%)
leucine-rich repeat 432..455 CDD:275380 3/22 (14%)
leucine-rich repeat 456..476 CDD:275380 7/19 (37%)
leucine-rich repeat 480..501 CDD:275380 0/20 (0%)
leucine-rich repeat 505..517 CDD:275378 0/11 (0%)
leucine-rich repeat 525..550 CDD:275380 7/25 (28%)
leucine-rich repeat 551..574 CDD:275380 9/24 (38%)
leucine-rich repeat 575..598 CDD:275380 7/22 (32%)
leucine-rich repeat 599..622 CDD:275380 7/22 (32%)
leucine-rich repeat 623..646 CDD:275380 6/22 (27%)
leucine-rich repeat 647..670 CDD:275380 7/22 (32%)
leucine-rich repeat 671..693 CDD:275380 8/21 (38%)
leucine-rich repeat 694..717 CDD:275380 7/22 (32%)
leucine-rich repeat 718..741 CDD:275380 7/22 (32%)
leucine-rich repeat 742..763 CDD:275380 11/20 (55%)
leucine-rich repeat 766..789 CDD:275380 5/22 (23%)
leucine-rich repeat 790..813 CDD:275380 8/25 (32%)
leucine-rich repeat 814..835 CDD:275380 7/21 (33%)
leucine-rich repeat 838..861 CDD:275380 7/24 (29%)
leucine-rich repeat 862..885 CDD:275380 4/22 (18%)
Toll-6NP_524081.1 PPP1R42 <135..>242 CDD:455733 36/127 (28%)
leucine-rich repeat 148..171 CDD:275380 9/23 (39%)
leucine-rich repeat 172..201 CDD:275380 10/48 (21%)
LRR_8 200..>246 CDD:404697 15/51 (29%)
leucine-rich repeat 202..278 CDD:275380 19/94 (20%)
leucine-rich repeat 229..249 CDD:275380 5/33 (15%)
leucine-rich repeat 279..302 CDD:275380 12/25 (48%)
LRR 299..654 CDD:443914 117/452 (26%)
leucine-rich repeat 303..326 CDD:275380 9/46 (20%)
leucine-rich repeat 327..350 CDD:275380 8/66 (12%)
leucine-rich repeat 352..375 CDD:275380 7/25 (28%)
leucine-rich repeat 376..401 CDD:275380 9/24 (38%)
leucine-rich repeat 402..425 CDD:275380 7/22 (32%)
leucine-rich repeat 426..449 CDD:275380 7/22 (32%)
leucine-rich repeat 450..473 CDD:275380 6/22 (27%)
leucine-rich repeat 474..497 CDD:275380 7/22 (32%)
leucine-rich repeat 498..518 CDD:275380 7/19 (37%)
leucine-rich repeat 521..544 CDD:275380 7/22 (32%)
leucine-rich repeat 545..566 CDD:275380 6/20 (30%)
leucine-rich repeat 569..592 CDD:275380 11/22 (50%)
leucine-rich repeat 593..615 CDD:275380 5/22 (23%)
leucine-rich repeat 616..637 CDD:275380 8/25 (32%)
leucine-rich repeat 638..662 CDD:275380 8/23 (35%)
LRR_8 662..719 CDD:404697 14/60 (23%)
leucine-rich repeat 663..684 CDD:275380 7/24 (29%)
leucine-rich repeat 685..708 CDD:275380 4/22 (18%)
leucine-rich repeat 709..728 CDD:275380 3/18 (17%)
LRR <863..>990 CDD:443914 4/10 (40%)
leucine-rich repeat 885..908 CDD:275380
leucine-rich repeat 909..932 CDD:275380
leucine-rich repeat 933..956 CDD:275380
TIR 1114..1247 CDD:214587
Blue background indicates that the domain is not in the aligned region.

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