DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and CG5819

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_611660.1 Gene:CG5819 / 37547 FlyBaseID:FBgn0034717 Length:915 Species:Drosophila melanogaster


Alignment Length:1040 Identity:233/1040 - (22%)
Similarity:381/1040 - (36%) Gaps:283/1040 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   355 DALPRLRYLDMSGNLLSELP--YGALRGHGTLEQLHLNHNHLRLIERDALMAMPALRELRMRNNS 417
            |.:| :.:||:|||...|.|  |..:   .:|..|.|:.|::..|....|:...:||.|.:.|||
  Fly    52 DGIP-VEHLDLSGNKFLEFPTLYADI---DSLIYLDLSSNYISSIGAKTLIGFTSLRTLLLANNS 112

  Fly   418 LSSDLPLPFWNLPGLKGLDLAQNQFARVDSQLLAGLPSLRRLDLSENGLIELAPNSFRHNPLLET 482
            :.|      |.       .|:.|:..:.       .|||:||.|..|.|     .||.:....|.
  Fly   113 IDS------WE-------SLSPNEAFKY-------APSLKRLGLDGNRL-----GSFGNGESFEL 152

  Fly   483 LNISSNELTKIHSSTLIHLERLFEV--DASYNQLKSVIAGLPRIVERISLKGNQITSLPAAASKD 545
            |  :|:.||.:..|:.    .:..:  |...|||.:        :||::|..||:..:.|..|: 
  Fly   153 L--TSSSLTDLGLSSC----GISSIGGDQMVNQLPN--------LERLNLANNQLAQIAALPSR- 202

  Fly   546 LQLPNLRMLDLSQNRIEQLPRHGFQGAMELRVLSLAQNE----------------LRQLKDTSFI 594
                .||:||||...|:.|..........|..|:|::|.                ||:| |.|:.
  Fly   203 ----TLRVLDLSNCSIKNLSGFFLDAMQNLEALNLSRNTELQFDSLSEDPILTYMLRKL-DVSYC 262

  Fly   595 GIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLEAITDNFFSNNSRLEQLDLSRNLIRS 659
            .:..:||..|.:             |.|:|   ||.|.|..:..|.|:|||.||.:|||:|::|.
  Fly   263 NLDSIELSGLPQ-------------LTEVR---LQGNLLRVVDVNTFANNSMLEVVDLSQNVLRH 311

  Fly   660 ISPTAFDTQRSLEYLDLSGNALLDISVGLGNLNNLRDIDLSYNQISRIQSDVIGGWRNVVEIRLS 724
            |...||                       ..|..|::::|::|:|:|:..:.|.....:||:.||
  Fly   312 IGQDAF-----------------------AKLKRLKELNLAFNEIARLDRNFIRNNDVLVELNLS 353

  Fly   725 NNLIVELQQGTFRNLPKLQYLDLSSNEIRNVEPGALKGLDELQEFVLADNKLVELKDHVFEELPS 789
            .|::.:|.:....:   ::.:::|..||.::|..||..|..:|:..|::|.:.::          
  Fly   354 RNVLQKLTKIVSNS---VRTINMSWCEITSIESTALSSLSVIQKLDLSNNLITDM---------- 405

  Fly   790 LLASHFQYNKLRYISPESFHNANSLVFLNLSNNHFRNMENIGLRSMRNLEVLDLSTNGVKLVSTM 854
                            .:|..:.:|..|||:|.....:.|...|...  |:.||..||.:|.|.:
  Fly   406 ----------------PTFMRSETLQQLNLANCRLTTVRNNTFREFP--ELADLHLNGNRLTSPI 452

  Fly   855 PLKALN--------WLVELKMDNNQICRIQGSP-----FETMPRLRVLSMRNNQLRSIKERTFRN 906
            |....:        ||    .||..||... ||     ::.:..........|.||......|..
  Fly   453 PPNYFDGNKFLDQLWL----GDNPWICDCH-SPLFVDFYDYLTAKPAKIKDRNHLRCAAPAVFYG 512

  Fly   907 VRGNIAILDVDGNPIDCNCEMQWLSVWLQETNFPYPGPKCQDGRLLRSARMERSLCVGADIYG-- 969
            .....|..|                ||:........|.|..      |..|...|.:||.:.|  
  Fly   513 KLWEFACAD----------------VWILNARTSSTGEKAW------SIIMLTLLGLGALVLGYA 555

  Fly   970 ------NERTDGNQLPLLNEHGDVFQRDLPDDFNDECEAGEGTRLPGDRPLVGESE--YFYDQYV 1026
                  .:|..........|:.|..:|  ..|.|:.....|.|      |.:..::  .....|.
  Fly   556 CLQKYLRKRKVRQSDREYEENDDELRR--IRDLNERILREEAT------PSLQHTQEISLLPSYE 612

  Fly  1027 DATEAPDTTHSAISTSQRPKPTPTINSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSL 1091
            ||...|...        ||     :.|.:||:.           |:....|         ..:..
  Fly   613 DALRMPKLV--------RP-----VKSMMDLSG-----------PERARNS---------RKLRR 644

  Fly  1092 GRFFGFGDRGRKQRTDSNDDMPATHRMAHISLPSGRGKTRMYQPNSAEFEKYLKDQQKQEKLNIA 1156
            .:....|| |.:...:....:.:..|...:.:.|.|.|.|     :|::..|            .
  Fly   645 SQTHADGD-GSQSEAEDGLQLDSRQRFRSVEMLSNRDKER-----TAQYGPY------------R 691

  Fly  1157 RNRYVDTDSTTS---SMEDA------LSNESGSAATTVGVFRT------TFREPSSIERGGFRPI 1206
            |..|::.:.:.|   |:||:      |..::..:|..:|.|::      |.|:|...|...|:.:
  Fly   692 RTGYMEYNQSGSRRFSIEDSRFPAAHLKTQNLQSAEQIGNFQSYENSPYTKRKPKIAEIPPFKRV 756

  Fly  1207 -VPAHVGGFMPVHDPQQRRGLVEVVNITGNPSEIVQGIGQRKFIPISTQARPKPT-KSSGESSET 1269
             :.|....|:.  ||:..    ||.:..|:|      ..:||..|   ...|.|| |.|.:....
  Fly   757 NMMADSVEFLT--DPEYD----EVGSKHGSP------FAKRKPKP---PVLPPPTMKVSAQVYTL 806

  Fly  1270 ATYEVTETTPDITTTTPLMQRIATSTTKASTTTTRSTTTTSTTQVTPAENNASSSTELDSQYDDE 1334
            ....|.|..|.|.......::..:|:|.||...........:   .|.:|.:|:.:..|.:.|.|
  Fly   807 QQSPVLELDPAIEDYFSAARKQPSSSTIASDFQELDEPELKS---LPDDNRSSTISRSDVEQDLE 868

  Fly  1335  1334
              Fly   869  868

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380 4/19 (21%)
PCC 891..>936 CDD:188093 8/44 (18%)
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914 48/178 (27%)
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
leucine-rich repeat 185..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..259 CDD:275380
leucine-rich repeat 260..283 CDD:275380
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..359 CDD:275380 1/3 (33%)
leucine-rich repeat 334..348 CDD:275378
PLN00113 359..>824 CDD:215061 122/484 (25%)
leucine-rich repeat 360..383 CDD:275380 8/24 (33%)
leucine-rich repeat 384..407 CDD:275380 6/22 (27%)
leucine-rich repeat 408..431 CDD:275380 8/22 (36%)
leucine-rich repeat 432..455 CDD:275380 2/22 (9%)
leucine-rich repeat 456..476 CDD:275380 8/19 (42%)
leucine-rich repeat 480..501 CDD:275380 6/20 (30%)
leucine-rich repeat 505..517 CDD:275378 4/13 (31%)
leucine-rich repeat 525..550 CDD:275380 7/24 (29%)
leucine-rich repeat 551..574 CDD:275380 8/22 (36%)
leucine-rich repeat 575..598 CDD:275380 9/38 (24%)
leucine-rich repeat 599..622 CDD:275380 4/22 (18%)
leucine-rich repeat 623..646 CDD:275380 9/22 (41%)
leucine-rich repeat 647..670 CDD:275380 10/22 (45%)
leucine-rich repeat 671..693 CDD:275380 1/21 (5%)
leucine-rich repeat 694..717 CDD:275380 6/22 (27%)
leucine-rich repeat 718..741 CDD:275380 6/22 (27%)
leucine-rich repeat 742..763 CDD:275380 6/20 (30%)
leucine-rich repeat 766..789 CDD:275380 3/22 (14%)
leucine-rich repeat 790..813 CDD:275380 1/22 (5%)
leucine-rich repeat 814..835 CDD:275380 7/20 (35%)
leucine-rich repeat 838..861 CDD:275380 8/30 (27%)
leucine-rich repeat 862..885 CDD:275380 7/27 (26%)
CG5819NP_611660.1 RNA1 <56..193 CDD:444072 48/178 (27%)
leucine-rich repeat 56..78 CDD:275380 8/24 (33%)
leucine-rich repeat 79..102 CDD:275380 6/22 (27%)
leucine-rich repeat 103..130 CDD:275380 10/46 (22%)
leucine-rich repeat 131..155 CDD:275380 10/30 (33%)
LRR 134..>466 CDD:443914 104/426 (24%)
leucine-rich repeat 158..182 CDD:275380 7/27 (26%)
leucine-rich repeat 204..227 CDD:275380 8/22 (36%)
leucine-rich repeat 254..274 CDD:275380 8/20 (40%)
leucine-rich repeat 275..298 CDD:275380 11/25 (44%)
leucine-rich repeat 299..322 CDD:275380 11/45 (24%)
leucine-rich repeat 323..346 CDD:275380 6/22 (27%)
leucine-rich repeat 347..391 CDD:275380 13/46 (28%)
leucine-rich repeat 392..413 CDD:275380 4/46 (9%)
leucine-rich repeat 414..437 CDD:275380 7/24 (29%)
LRRCT 471..517 CDD:214507 9/46 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.