DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and conv

DIOPT Version :9

Sequence 1:NP_001262113.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_001286416.1 Gene:conv / 36588 FlyBaseID:FBgn0261269 Length:1092 Species:Drosophila melanogaster


Alignment Length:1177 Identity:284/1177 - (24%)
Similarity:488/1177 - (41%) Gaps:221/1177 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 CP-PSQAILPCRCSLRGKE--IQIWCSHSNLPQIMDGLKAVERNIKG---RIDELVLENNQLPAL 80
            || .|:|:.||.| ::|.:  :.|.|.::||..:...|    :|:..   .|:||.:.......|
  Fly    31 CPKKSKALYPCEC-VKGSDNGLYIRCENTNLATLSVAL----QNLASFGMPIEELTIYRGHFVRL 90

  Fly    81 PGRFFGSLQIVRLMLRHNSIERVSNGWLNELENGLVEIFVVEPQLRSIPAESLNGMINMLAITIQ 145
            .|..|..::...|::....:..:.:.....:.|.|.::.::...|..:.......:.....:.|.
  Fly    91 YGPLFAHIKARMLIIEETPLATIEDYVFYGVNNTLEQLHLLRTNLSHVGLLGFGILGKAKELVID 155

  Fly   146 SEELKHLPD--FSG---LLSLTYLSVQTGALQELPSHLFRHLPKLQHIHITGGSGLTRLEAGLFD 205
            ....:.||.  |:|   ..||..:.|..|.|.:||...|:.|.||:.:.:.|.. |..|:...|.
  Fly   156 GHAFQQLPKDLFAGQEIANSLGIIRVTNGNLSDLPIETFQPLRKLKTLDLHGNQ-LENLKRNQFK 219

  Fly   206 GLISLKNLDLSHNGLNWIHLRALSRLPNLVSLKLSHNQISDVGMVGRIVKDLEHLKKLRLDNNLI 270
            .|..|:.||:|||.:..:..:.::.|..|....:|||.:|::.. |...:: ..||.|.|.:|.|
  Fly   220 NLRELEVLDISHNQIKKLEAQHIADLTKLGWCNVSHNALSELSR-GTFARN-SVLKVLHLSHNQI 282

  Fly   271 TVIEDGSFVDLPNLSELHLNDNRITELQYGAFLRTPQLKTIYLQNNLIRRIHPESLLQASGSGVE 335
            ..::..||..:..|..|.|:||.:|::..|.|....::.||.|..|.:::|..:...|.  :.||
  Fly   283 ARLDANSFRGMRFLRRLFLSDNVLTDIGRGTFGSIARIGTIDLARNRLKKIEFQMFTQM--NYVE 345

  Fly   336 AVHMYNNEIGHVE--ALRALLDALPRLRYLDMSGNLLSELPYGALRGHGTLEQLHLNHNHLRLIE 398
            .:.:..|.|..:|  :.:.:..|:     :::|.|.|..:...|......:..|.|:||.|....
  Fly   346 LLDLAENNITKIEKNSFKDIYQAI-----INVSHNALELIETAAFENCVNITVLDLSHNRLANFS 405

  Fly   399 RDALMAMPALRELRMRNNSLSSDLPLPFWNLPGLKGLDLAQNQFARVDSQLLAGLPSLRRLDLSE 463
            |.:..........::..|:|::...:|..|:.|||.|:.:.|....:.......|..|..:|:|.
  Fly   406 RRSFDETTFATYFQLSYNNLTNLAQIPIQNMTGLKVLNASYNSITEIPKNCFPKLYELHTIDVSH 470

  Fly   464 NGLIELAPNSFRHNPLLETLNISSNELTKIHSSTLIHLERLFEVDASYNQLKSVIAG-LPRI--V 525
            |.:..:....|:....|.::::|.|.:.:|.|||...|..|.|:|.|:|:|.||:.| |.::  :
  Fly   471 NNISSIFNGVFQTLFSLRSIDLSHNSMREIKSSTFGTLPTLLEMDLSHNELVSVVRGSLAKLTSL 535

  Fly   526 ERISLKGNQITSLPAAASKDLQLP-NLRMLDLSQNRIEQLPRHGFQGAMELRVLSLAQNELRQ-L 588
            .::.|..||:..|       .||| :|..|..|.||:..:|...:.....|..|.|:.|:|.. |
  Fly   536 RQLYLNNNQLEKL-------FQLPISLNELYFSHNRLTNIPSGTWPVMNSLIYLDLSHNQLGDTL 593

  Fly   589 KDTSFIGIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLEAITDNFFSNNSRLEQLDLS 653
            ...||.|:..::.|.||.|.:.:..:.|:..::.|:.|:|::|.:..:..:.|.....|.:|:|.
  Fly   594 NGESFTGLLVVQRLKLQNNGISQPPKDAVAVMSTLQYLHLENNNITTLERSAFGKLPVLFELNLY 658

  Fly   654 RNLIRSISPTAFDTQRSLEYLDLSGNALL----DISVGLGNLNNLRDIDLSYNQISRIQSDVIGG 714
            .|.::.||..||:....|..|:||.|.:.    ||.|||.:|.||   |||:|.::::.:...|.
  Fly   659 GNQVKDISKRAFEGLLQLLTLNLSSNGIQTLQNDIFVGLPSLRNL---DLSFNSLTKLDNKTNGV 720

  Fly   715 WRNVVEIR---LSNNLIVELQQGTF----------RNL-------PKLQY-----------LDLS 748
            ..:::.:.   ||:|.|..:.:.||          |||       |.|.|           ||:|
  Fly   721 LDDLLSLETLDLSHNRISFVTKKTFPSHQYIPYNLRNLNLSYNLMPILTYDITFGTKKLVRLDVS 785

  Fly   749 SNEIRNVEPGALKGLDELQEFVLADNKLVELK--DHVFEELPSLLASHFQYNKLRYISPESFHNA 811
            .|:|.::..|.:.....||...::.|:|..||  :|:| :||                       
  Fly   786 HNQINDLRRGVISNFTSLQSLDMSYNELSNLKSEEHIF-DLP----------------------- 826

  Fly   812 NSLVFLNLSNNHFRNMENIGLRSMRNLEVLDLSTNGVKLVSTMPLKALNWLVELKMDNNQICRIQ 876
            .:|.:|:||:|...::....|..:::|:.:||:.|.:                            
  Fly   827 QNLSWLDLSHNKIYHLPFANLVKVKSLKYVDLTNNSL---------------------------- 863

  Fly   877 GSPFETMPRLRVLSMRNNQLRSIKERTFRNVRGNIAILDVDGNPIDCNCEMQWLSVW-LQET--- 937
                |.:|...|.||||               |:..:|  .|||:.|.|..:.|..: ||:|   
  Fly   864 ----EDVPASIVGSMRN---------------GSQVLL--AGNPLHCGCNARPLKYFMLQQTIAG 907

  Fly   938 ---NFPYPGPKC---------QDGRLLRSARMERSLCVGADIYGNERTD----------GNQLPL 980
               ...|.|...         .|...|..|..|:.:..|.|.  .:.||          ...|.|
  Fly   908 EDLKSIYCGTPALIKDKQLISLDDEYLHCAEDEQEMYKGIDY--EQLTDVRFREVKTNKAGMLTL 970

  Fly   981 ---LNEHGDV--FQRDLPDDFNDECEAGEGTRLPGDRPLVGESEYFYDQYVDATEAPDTTHSAIS 1040
               ::...||  |...:....||               ::.:|:|.|:.  ...:.|....|.:.
  Fly   971 CWYVSGFSDVSDFHVYIRSSSND---------------VLHQSDYAYNN--RTAQIPVEELSTLG 1018

  Fly  1041 TSQRPKPTPTINSNIDLNNTILHTKYFNRKPQPGSGSPFTFFGYPLPSVSLGRFFGFGD---RGR 1102
            ..:.......|.|.....||   .|:|:.:.|            .|||:...|.|.||:   ||.
  Fly  1019 EEKLRGAEICIVSRDSDGNT---RKWFSGQCQ------------QLPSLKRPRTFFFGNFQVRGG 1068

  Fly  1103 KQRTDSN 1109
            ..||.|:
  Fly  1069 VSRTSSS 1075

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_001262113.1 leucine-rich repeat 69..89 CDD:275380 5/19 (26%)
leucine-rich repeat 90..113 CDD:275380 1/22 (5%)
leucine-rich repeat 115..138 CDD:275380 2/22 (9%)
leucine-rich repeat 139..160 CDD:275380 5/25 (20%)
leucine-rich repeat 161..184 CDD:275380 8/22 (36%)
LRR_8 183..244 CDD:290566 18/60 (30%)
leucine-rich repeat 185..209 CDD:275380 6/23 (26%)
LRR_4 209..247 CDD:289563 12/37 (32%)
leucine-rich repeat 210..233 CDD:275380 7/22 (32%)
leucine-rich repeat 234..259 CDD:275380 6/24 (25%)
LRR_RI 250..492 CDD:238064 57/243 (23%)
LRR_8 259..318 CDD:290566 20/58 (34%)
leucine-rich repeat 260..283 CDD:275380 8/22 (36%)
leucine-rich repeat 284..307 CDD:275380 8/22 (36%)
leucine-rich repeat 308..359 CDD:275380 12/52 (23%)
leucine-rich repeat 334..348 CDD:275378 4/13 (31%)
LRR_8 358..418 CDD:290566 11/59 (19%)
leucine-rich repeat 360..383 CDD:275380 4/22 (18%)
leucine-rich repeat 384..407 CDD:275380 6/22 (27%)
LRR_8 406..466 CDD:290566 14/59 (24%)
leucine-rich repeat 408..431 CDD:275380 4/22 (18%)
leucine-rich repeat 432..455 CDD:275380 5/22 (23%)
LRR_RI 447..705 CDD:238064 81/266 (30%)
LRR_8 454..514 CDD:290566 18/59 (31%)
leucine-rich repeat 456..476 CDD:275380 5/19 (26%)
leucine-rich repeat 480..501 CDD:275380 7/20 (35%)
leucine-rich repeat 505..517 CDD:275378 5/11 (45%)
leucine-rich repeat 525..550 CDD:275380 7/25 (28%)
LRR_8 549..609 CDD:290566 20/61 (33%)
leucine-rich repeat 551..574 CDD:275380 6/22 (27%)
leucine-rich repeat 575..598 CDD:275380 9/23 (39%)
leucine-rich repeat 599..622 CDD:275380 5/22 (23%)
LRR_8 622..681 CDD:290566 18/58 (31%)
leucine-rich repeat 623..646 CDD:275380 5/22 (23%)
LRR_RI 647..896 CDD:238064 71/285 (25%)
leucine-rich repeat 647..670 CDD:275380 8/22 (36%)
leucine-rich repeat 671..693 CDD:275380 11/25 (44%)
leucine-rich repeat 694..717 CDD:275380 6/22 (27%)
LRR_8 716..776 CDD:290566 21/90 (23%)
leucine-rich repeat 718..741 CDD:275380 9/42 (21%)
leucine-rich repeat 742..763 CDD:275380 8/31 (26%)
LRR_8 765..824 CDD:290566 15/60 (25%)
leucine-rich repeat 766..789 CDD:275380 9/24 (38%)
leucine-rich repeat 790..813 CDD:275380 0/22 (0%)
leucine-rich repeat 814..835 CDD:275380 6/20 (30%)
leucine-rich repeat 838..861 CDD:275380 4/22 (18%)
LRR_8 862..921 CDD:290566 11/58 (19%)
leucine-rich repeat 862..885 CDD:275380 1/22 (5%)
leucine-rich repeat 886..906 CDD:275380 5/19 (26%)
TPKR_C2 919..>946 CDD:301599 10/33 (30%)
convNP_001286416.1 leucine-rich repeat 125..148 CDD:275380 2/22 (9%)
leucine-rich repeat 150..175 CDD:275380 5/24 (21%)
leucine-rich repeat 176..199 CDD:275380 8/22 (36%)
LRR_8 198..258 CDD:290566 18/60 (30%)
leucine-rich repeat 200..223 CDD:275380 6/23 (26%)
LRR_RI 201..545 CDD:238064 91/353 (26%)
leucine-rich repeat 224..271 CDD:275380 13/48 (27%)
LRR_8 245..306 CDD:290566 20/62 (32%)
leucine-rich repeat 272..295 CDD:275380 8/22 (36%)
LRR_8 296..354 CDD:290566 17/59 (29%)
leucine-rich repeat 296..319 CDD:275380 8/22 (36%)
LRR_8 322..401 CDD:290566 20/85 (24%)
leucine-rich repeat 322..343 CDD:275380 6/22 (27%)
leucine-rich repeat 344..367 CDD:275380 5/22 (23%)
leucine-rich repeat 371..390 CDD:275380 4/18 (22%)
leucine-rich repeat 391..414 CDD:275380 6/22 (27%)
leucine-rich repeat 416..438 CDD:275380 4/21 (19%)
LRR_8 437..495 CDD:290566 13/57 (23%)
leucine-rich repeat 439..462 CDD:275380 5/22 (23%)
leucine-rich repeat 463..486 CDD:275380 5/22 (23%)
LRR_RI 486..738 CDD:238064 79/261 (30%)
LRR_8 486..545 CDD:290566 20/58 (34%)
leucine-rich repeat 487..510 CDD:275380 8/22 (36%)
leucine-rich repeat 511..534 CDD:275380 10/22 (45%)
leucine-rich repeat 535..554 CDD:275380 7/25 (28%)
LRR_8 554..614 CDD:290566 19/59 (32%)
leucine-rich repeat 555..578 CDD:275380 6/22 (27%)
leucine-rich repeat 579..603 CDD:275380 9/23 (39%)
leucine-rich repeat 604..627 CDD:275380 5/22 (23%)
LRR_8 626..710 CDD:290566 30/86 (35%)
leucine-rich repeat 628..649 CDD:275380 5/20 (25%)
leucine-rich repeat 652..672 CDD:275380 8/19 (42%)
LRR_8 698..765 CDD:290566 17/69 (25%)
leucine-rich repeat 700..726 CDD:275380 8/28 (29%)
leucine-rich repeat 727..745 CDD:275380 4/17 (24%)
LRR_8 777..839 CDD:290566 21/85 (25%)
leucine-rich repeat 779..802 CDD:275380 6/22 (27%)
leucine-rich repeat 829..852 CDD:275380 6/22 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm42484
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR45617
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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