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Protein Alignment atk and CG18095

DIOPT Version :9

Sequence 1:	NP_001262113.1	Gene:	atk / 40266	FlyBaseID:	FBgn0036995	Length:	1535	Species:	Drosophila melanogaster
Sequence 2:	NP_001188805.1	Gene:	CG18095 / 34823	FlyBaseID:	FBgn0028872	Length:	564	Species:	Drosophila melanogaster

Alignment Length:	523	Identity:	141/523 - (26%)
Similarity:	246/523 - (47%)	Gaps:	79/523 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly   454 PSLRRLDLSENGLIELAPNSFRHNPLLETLNISSNELTKIHSSTLIHLERLFEVDASYNQLKSV- 517
            |.|..|.||:....|:  ...|...||.:|.:|:..|..:.:...:..:.|..::..::.|..:
  Fly    17 PRLSCLQLSKCNNTEV--TLIRKTELLTSLTLSNCTLPHVENGFFVRFDHLLHLELQHSGLSDLD 79

  Fly   518 ---IAGLPRIVERISLKGNQITSLPAAASKDLQLPNLRMLDLSQNRIEQLPRHGFQGAMELRVLS 579
               :.||.:: :.:||..|.::||.:.:|:.|..  |..||||.|.:.:|....|:...:|:.|.
  Fly    80 DFSLNGLTKL-QYLSLSHNNLSSLRSWSSEPLGA--LTNLDLSHNMLSKLSVKSFEQYPQLQQLD 141

  Fly   580 LAQNELRQLKDTSFIGIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLEAITDNFFSNN 644
            |..|.:.|:::.||.|:..|:.|:|..|||...|......|..|.:|:||.|::|.|..:.|.:|
  Fly   142 LRYNRISQIENDSFDGLSHLKHLYLNGNQLAHIDGSFFRGLHRLSSLSLQHNRIEFIEMDSFESN 206

  Fly   645 SRLEQLDLSRNLIRSISPTAFDTQRSLE---YLDLSGNALLDISVGLGNLN-NLRDIDLSYNQIS 705
            :.|..|.|.:||:.|:.   |.:||.|.   :|:||.|.|..:...:.:.| .|:|:|||||.|:
  Fly   207 THLRSLRLDQNLLSSLQ---FLSQRGLARLVHLNLSSNLLQKLEPFVFSKNFELQDLDLSYNNIT 268

  Fly   706 RIQSDVIGGWRNVVEIRLSNNLIVELQQGTFRNLPKLQYLDLSSNEIRNVEPGALKGLDELQEFV 770
            ::..:.:.|..::..:.:|:|.:.::...:..:|..|..||:|.|.:..:.........:|:|.:
  Fly   269 KLNKEALSGLDSLERLNISHNYVDKIYDESLDSLIALLQLDISFNLLTTLPDNLFHFNTQLEEII 333

  Fly   771 LADNKLVELKDHVFEELPSLLASHFQYNKLRYI--SPESFHNANSLVFLNLSNNHF--------R 825
            ||:||:.|:...:.          |..|.||||  |..:..:|..|..|:.|.|.|        .
  Fly   334 LANNKIEEISSQMM----------FNQNHLRYIKLSGNAISDAAFLDRLSPSVNRFTLYVDLSSN 388

  Fly   826 NMENIGLRSMRNLEVLDLSTNGVKLVSTMPLKALNWLVELKMDNNQICRIQGSPFETMPRLRVLS 890
            .::::.|.|:.:...::|:.|.         .:.||||.     |.:.::..|    :...|..:
  Fly   389 RLKSLNLSSLLHFRYINLADNN---------WSCNWLVA-----NLVQKLPNS----VNFARPWT 435

  Fly   891 MRNNQLRSIKERTFRNVRG----------NIAILDVDGNP----IDCNCEMQWLSVWLQETNFPY 941
            :.||    :.|.| .||.|          :|.:|||.|.|    .:|:|.:.:     .||| |.
  Fly   436 VINN----LSENT-TNVEGIDCIEGGTNRSIILLDVSGVPQPKSDNCDCVVAY-----DETN-PS 489

  Fly   942 PGP 944
            |.|
  Fly   490 PPP 492

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.