DRSC/TRiP Functional Genomics Resources

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Protein Alignment atk and LOC3291930

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:XP_553167.4 Gene:LOC3291930 / 3291930 VectorBaseID:AGAMI1_004435 Length:314 Species:Anopheles gambiae


Alignment Length:305 Identity:71/305 - (23%)
Similarity:125/305 - (40%) Gaps:56/305 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   480 LETLNISSNELTKIHSSTLIHLERLFEVDASYNQLKSVIAGLPRIVERISLKGNQITSLPAAASK 544
            ::||.:....:..||          ||.:.|              ::.::::.:.||::|...  
Mosquito    52 IQTLIMYKTGVRNIH----------FEKNGS--------------IKSVTIRNSPITNIPTTL-- 90

  Fly   545 DLQLPNLRMLDLSQNRIEQLPRHGFQGAMELRVLSLAQNELRQLKDTSFIGIQR-LELLHLQENQ 608
             |.||.::.:.|...:|..:....|.....|..|.|..:.|..:.......:.. |.:::|..|.
Mosquito    91 -LTLPAIQHILLEYTKIASIDLSWFYPLKGLATLKLVNSNLLVVHGDGRTNVTTGLNVINLSYNS 154

  Fly   609 LGEADERALLPLAELRNLNLQSNKLEAITDNFFSNNSRLEQLDLSRNLIRSISPTAFDTQRSLEY 673
            |...:.....|.|||..|.|..||||::|...  |...|..|.|:.|.::.:....::..:.|:.
Mosquito   155 LRTLNLNGFAPFAELTQLVLTHNKLESLTGTL--NIPALTGLMLNHNRLKQLDACQWNDTQQLQG 217

  Fly   674 LDLSGNALLDISVGLGNLNNLRDIDLSYNQISRIQSDVIGGWRNVVEIRLSNNLIVELQQGTFRN 738
            :.|:.|.|..:...|....:|..|||::|:|..::      |.             :|||     
Mosquito   218 ITLAHNYLRQVPACLERFASLAHIDLNHNRIGYVR------WE-------------DLQQ----- 258

  Fly   739 LPKLQYLDLSSNEIRNVEPGALKGLDELQEFVLADN--KLVELKD 781
            ||||..:|||.|.|..:.|...:....|::.||..|  ::|.:.|
Mosquito   259 LPKLASIDLSFNRITAIPPDQAQYPSLLKQLVLYGNPIEVVTIPD 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380
PCC 891..>936 CDD:188093
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914 7/49 (14%)
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
leucine-rich repeat 185..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..259 CDD:275380
leucine-rich repeat 260..283 CDD:275380
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..359 CDD:275380
leucine-rich repeat 334..348 CDD:275378
PLN00113 359..>824 CDD:215061 71/305 (23%)
leucine-rich repeat 360..383 CDD:275380
leucine-rich repeat 384..407 CDD:275380
leucine-rich repeat 408..431 CDD:275380
leucine-rich repeat 432..455 CDD:275380
leucine-rich repeat 456..476 CDD:275380
leucine-rich repeat 480..501 CDD:275380 4/20 (20%)
leucine-rich repeat 505..517 CDD:275378 3/11 (27%)
leucine-rich repeat 525..550 CDD:275380 5/24 (21%)
leucine-rich repeat 551..574 CDD:275380 3/22 (14%)
leucine-rich repeat 575..598 CDD:275380 4/22 (18%)
leucine-rich repeat 599..622 CDD:275380 5/22 (23%)
leucine-rich repeat 623..646 CDD:275380 9/22 (41%)
leucine-rich repeat 647..670 CDD:275380 4/22 (18%)
leucine-rich repeat 671..693 CDD:275380 5/21 (24%)
leucine-rich repeat 694..717 CDD:275380 7/22 (32%)
leucine-rich repeat 718..741 CDD:275380 4/22 (18%)
leucine-rich repeat 742..763 CDD:275380 7/20 (35%)
leucine-rich repeat 766..789 CDD:275380 6/18 (33%)
leucine-rich repeat 790..813 CDD:275380
leucine-rich repeat 814..835 CDD:275380
leucine-rich repeat 838..861 CDD:275380
leucine-rich repeat 862..885 CDD:275380
LOC3291930XP_553167.4 None
Blue background indicates that the domain is not in the aligned region.

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