DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and Nrros

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_001020166.1 Gene:Nrros / 303875 RGDID:1310771 Length:692 Species:Rattus norvegicus


Alignment Length:658 Identity:175/658 - (26%)
Similarity:256/658 - (38%) Gaps:214/658 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   424 LPFWNLPGL----------KGLDLAQNQ--------FARVDSQLLAGLPS-----LRRLDLSENG 465
            ||.|...|.          :|...|.:|        .|...|..||.:||     .|.|.|..|.
  Rat     4 LPLWLCLGFHFLIVEWRSGRGTATAASQGGCKVVDRVADCRSLNLASVPSGLPAHSRMLVLDANP 68

  Fly   466 LIELAPNSFRHNPLLETLNISSNELTKI-----HSSTLIHLERLFEVD----ASYNQLKSVIAGL 521
            |..|..:|.:..|.||.|::.|..|.:|     |...  ||:.|...|    .:|.:..:.:..|
  Rat    69 LRVLWNHSLQAYPRLEDLSLHSCHLDRISHWAFHEQG--HLQNLVLADNRLSENYKESATALHTL 131

  Fly   522 PRIVERISLKGNQITSLPAAASKDLQLPNLRMLDLSQNRIEQLPRHGFQGAMELRVLSLAQNELR 586
            .|: .|:.|.||.:|...||    |.|.||..|:                     |:|||:|.|.
  Rat   132 LRL-RRLDLSGNSLTEDMAA----LMLQNLSSLE---------------------VVSLARNTLM 170

  Fly   587 QLKDTSFIGIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLEAITDNFFSNNSRLEQLD 651
            :|.|:.|.|::||..|.||.|.:.|.:..|...|.|||.|||..|.|..|.|  || .::|..|:
  Rat   171 RLDDSVFEGLERLVELDLQRNYIFEIEGGAFDGLTELRRLNLAYNNLPCIVD--FS-LTQLRFLN 232

  Fly   652 LSRNLIRSISPTAFDTQRSLEYLDLSGNALL-----------------DISVGL----------- 688
            :|.|::........:....||.||||.|.||                 |.|:|.           
  Rat   233 VSYNILEWFLAAREEAAFELEILDLSHNQLLFFPLLPQCGKLHTLLLQDNSMGFYRELYNTSSPQ 297

  Fly   689 ----------GNLNNLRDIDL----SYNQISRIQSDVIGGWRNVVEIRLSNNLIVELQQGTFRNL 739
                      ||:.|:..:.|    |.:.:|.::.           :.:|.|.:..|..|..:..
  Rat   298 EMVAQFLLVDGNVTNITTVSLWEEFSSSDLSALRF-----------LDMSQNQLRHLPDGFLKKT 351

  Fly   740 PKLQYLDLSSN-----EIRNVE-PGALKGLDELQEFVLADNKLVELKDHVFE----ELPSLLASH 794
            |.|.:|:|:.|     .||..| ||||..||      |:.|:|.||  |:..    .|.:|...:
  Rat   352 PSLSHLNLNQNCLTKLHIREHEPPGALTELD------LSRNQLAEL--HLAPGLTGSLKNLRVFN 408

  Fly   795 FQYNKLRYISPESFHNANSLVFLNLSNNH--------------------FRNMENI--------G 831
            ...|:|..:....||:|:|:..|::|:|.                    ||||.::        |
  Rat   409 LSSNQLLGVPTGLFHSASSITTLDMSHNQISLCPQTVPLDWEEPSSCVDFRNMASLRSLSLDGCG 473

  Fly   832 LRSMR-------NLEVLDLSTN-GVKLVSTMPLKALNWLVELKMDNNQICRIQGSPFETMPRLRV 888
            |::::       :|..||||:| |:...|..||.|:                       .|.|:|
  Rat   474 LKALQDCPFQGTSLTHLDLSSNWGILNGSVSPLSAV-----------------------APTLQV 515

  Fly   889 LSMRNNQLRS-IKERTFRNVRGNIAILDVDGNPIDCNCEMQWLSVWLQETNFPYPGPKCQDGRLL 952
            ||:||..|.| ..|..|... ||:..||:.||.:               |:|    ||.:....|
  Rat   516 LSLRNVGLGSGAAEMDFSGF-GNLRELDLSGNSL---------------TSF----PKFKGSSAL 560

  Fly   953 RSARMERS 960
            ::..:.|:
  Rat   561 QTLDLRRN 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380 10/20 (50%)
PCC 891..>936 CDD:188093 12/45 (27%)
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914 36/137 (26%)
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
leucine-rich repeat 185..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..259 CDD:275380
leucine-rich repeat 260..283 CDD:275380
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..359 CDD:275380
leucine-rich repeat 334..348 CDD:275378
PLN00113 359..>824 CDD:215061 135/503 (27%)
leucine-rich repeat 360..383 CDD:275380
leucine-rich repeat 384..407 CDD:275380
leucine-rich repeat 408..431 CDD:275380 3/6 (50%)
leucine-rich repeat 432..455 CDD:275380 7/40 (18%)
leucine-rich repeat 456..476 CDD:275380 7/19 (37%)
leucine-rich repeat 480..501 CDD:275380 7/25 (28%)
leucine-rich repeat 505..517 CDD:275378 2/15 (13%)
leucine-rich repeat 525..550 CDD:275380 9/24 (38%)
leucine-rich repeat 551..574 CDD:275380 2/22 (9%)
leucine-rich repeat 575..598 CDD:275380 10/22 (45%)
leucine-rich repeat 599..622 CDD:275380 8/22 (36%)
leucine-rich repeat 623..646 CDD:275380 11/22 (50%)
leucine-rich repeat 647..670 CDD:275380 4/22 (18%)
leucine-rich repeat 671..693 CDD:275380 14/59 (24%)
leucine-rich repeat 694..717 CDD:275380 3/26 (12%)
leucine-rich repeat 718..741 CDD:275380 4/22 (18%)
leucine-rich repeat 742..763 CDD:275380 11/26 (42%)
leucine-rich repeat 766..789 CDD:275380 7/26 (27%)
leucine-rich repeat 790..813 CDD:275380 6/22 (27%)
leucine-rich repeat 814..835 CDD:275380 9/48 (19%)
leucine-rich repeat 838..861 CDD:275380 11/23 (48%)
leucine-rich repeat 862..885 CDD:275380 0/22 (0%)
NrrosNP_001020166.1 leucine-rich repeat 39..57 CDD:275380 6/17 (35%)
LRR 1. /evidence=ECO:0000255 58..79 7/20 (35%)
leucine-rich repeat 60..82 CDD:275380 7/21 (33%)
LRR 2. /evidence=ECO:0000255 82..103 6/20 (30%)
leucine-rich repeat 83..106 CDD:275380 7/24 (29%)
LRR 3. /evidence=ECO:0000255 106..127 5/20 (25%)
leucine-rich repeat 107..158 CDD:275380 17/55 (31%)
LRR 4. /evidence=ECO:0000255 133..155 10/26 (38%)
LRR <140..414 CDD:443914 90/320 (28%)
LRR 5. /evidence=ECO:0000255 158..179 10/41 (24%)
leucine-rich repeat 159..182 CDD:275380 11/43 (26%)
LRR 6. /evidence=ECO:0000255 182..203 8/20 (40%)
leucine-rich repeat 183..206 CDD:275380 8/22 (36%)
LRR 7. /evidence=ECO:0000255 206..227 12/23 (52%)
leucine-rich repeat 207..251 CDD:275380 15/46 (33%)
LRR 8. /evidence=ECO:0000255 228..239 4/10 (40%)
LRR 9. /evidence=ECO:0000255 251..272 9/20 (45%)
leucine-rich repeat 252..273 CDD:275380 9/20 (45%)
LRR 10. /evidence=ECO:0000255 273..294 3/20 (15%)
leucine-rich repeat 274..329 CDD:275380 8/54 (15%)
LRR 293..>595 CDD:443914 81/338 (24%)
LRR 11. /evidence=ECO:0000255 329..350 4/31 (13%)
leucine-rich repeat 330..353 CDD:275380 4/33 (12%)
LRR 12. /evidence=ECO:0000255 353..374 6/20 (30%)
leucine-rich repeat 354..377 CDD:275380 8/22 (36%)
LRR 13. /evidence=ECO:0000255 377..398 10/28 (36%)
leucine-rich repeat 378..403 CDD:275380 10/32 (31%)
LRR 14. /evidence=ECO:0000255 403..424 4/20 (20%)
leucine-rich repeat 404..427 CDD:275380 6/22 (27%)
LRR 15. /evidence=ECO:0000255 427..448 4/20 (20%)
leucine-rich repeat 428..463 CDD:275380 7/34 (21%)
LRR 16. /evidence=ECO:0000255 463..484 2/20 (10%)
leucine-rich repeat 464..486 CDD:275380 2/21 (10%)
LRR 17. /evidence=ECO:0000255 486..507 9/20 (45%)
leucine-rich repeat 487..512 CDD:275380 11/47 (23%)
LRR 18. /evidence=ECO:0000255 512..533 9/20 (45%)
leucine-rich repeat 513..537 CDD:275380 10/24 (42%)
LRR 19. /evidence=ECO:0000255 537..558 9/39 (23%)
leucine-rich repeat 538..559 CDD:275380 8/39 (21%)
LRR 20. /evidence=ECO:0000255 559..580 2/10 (20%)
LRR 21. /evidence=ECO:0000255 585..605
Blue background indicates that the domain is not in the aligned region.

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