DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and Nrros

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_666181.3 Gene:Nrros / 224109 MGIID:2445095 Length:693 Species:Mus musculus


Alignment Length:640 Identity:163/640 - (25%)
Similarity:253/640 - (39%) Gaps:181/640 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   354 LDALPRLRYLDMSGNLLSELPYGALRGHGTLEQLHLNHNHLRLIERD---ALMAMPALRELRMRN 415
            |.|.|||..|.:....|..:.:.|.|..|.|..|.|..|.|....::   ||..:..||.|.:..
Mouse    77 LQAYPRLENLSLHSCHLDRISHYAFREQGHLRNLVLADNRLSENYKESAAALHTLLGLRRLDLSG 141

  Fly   416 NSLSSDL-PLPFWNLPGLKGLDLAQNQFARVDSQLLAGLPSLRRLDLSENGLIELAPNSFRHNPL 479
            |||:.|: .|...||..|:.:.||:|...|:|..:..||..|..|||..|.:.|:...:|.....
Mouse   142 NSLTEDMAALMLQNLSSLEVVSLARNTLMRLDDSIFEGLEHLVELDLQRNYIFEIEGGAFDGLTE 206

  Fly   480 LETLNISSNELTKIHSSTLIHLERLFEVDASYNQLKSVIAGLPRIVERISLKGNQITSLPAAASK 544
            |..||::.|.|..|...:|..|..|   :.|||.|:..:|..    |.::.:             
Mouse   207 LRRLNLAYNNLPCIVDFSLTQLRFL---NVSYNILEWFLAAR----EEVAFE------------- 251

  Fly   545 DLQLPNLRMLDLSQNRI---EQLPRHGFQGAMELRVLSLAQNEL---RQLKDTS--------FI- 594
                  |.:||||.|::   ..||:.|     :|..|.|..|.:   |:|.:||        |: 
Mouse   252 ------LEILDLSHNQLLFFPLLPQCG-----KLHTLLLQDNNMGFYRELYNTSSPQEMVAQFLL 305

  Fly   595 ---GIQRLELLHLQENQLGEADERALLPLAELRNLNLQSNKLEAITDNFFSNNSRLEQLDLSRNL 656
               .:..:..::|.| :...:|      |:.||.|::..|:...:.|.|......|..|:|::|.
Mouse   306 VDGNVTNITTVNLWE-EFSSSD------LSALRFLDMSQNQFRHLPDGFLKKTPSLSHLNLNQNC 363

  Fly   657 IRSISPTAFDTQRSLEYLDLSGNAL--LDISVGL-GNLNNLRDIDLSYNQISRIQSDVIGGWRNV 718
            ::.:.....:...:|..||||.|.|  |.::.|| |:|.|||..:||.||:..:.:         
Mouse   364 LKMLHIREHEPPGALTELDLSHNQLAELHLAPGLTGSLRNLRVFNLSSNQLLGVPT--------- 419

  Fly   719 VEIRLSNNLIVELQQGTFRNLPKLQYLDLSSNEIRNVEPGALKGLDELQEFVLADNKLVELKDHV 783
                           |.|.|...:..:|:|.|:| ::.|          :.|..|          
Mouse   420 ---------------GLFDNASSITTIDMSHNQI-SLCP----------QMVPVD---------- 448

  Fly   784 FEELPSLLASHFQYNKLRYISPESFHNANSLVFLNLSNNHFRNMENIGLRSMR-------NLEVL 841
            :|..||.:               .|.|..||..|:|        :..||::::       :|..|
Mouse   449 WEGPPSCV---------------DFRNMGSLRSLSL--------DGCGLKALQDCPFQGTSLTHL 490

  Fly   842 DLSTN-GVKLVSTMPLKALNWLVELKMDNNQICRIQGSPFETMPRLRVLSMRNNQLRSIKERTFR 905
            |||:| ||...|..||    |.|                   .|.|:|||:|:..|.|.......
Mouse   491 DLSSNWGVLNGSISPL----WAV-------------------APTLQVLSLRDVGLGSGAAEMDF 532

  Fly   906 NVRGNIAILDVDGNPIDCNCEMQWLSVWLQETNFPYPGPKCQDGRLLRSARMERS 960
            :..||:..||:.||.:               |:|    ||.:....||:..:.|:
Mouse   533 SAFGNLRALDLSGNSL---------------TSF----PKFKGSLALRTLDLRRN 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380 7/19 (37%)
PCC 891..>936 CDD:188093 9/44 (20%)
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914 57/179 (32%)
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
leucine-rich repeat 185..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..259 CDD:275380
leucine-rich repeat 260..283 CDD:275380
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..359 CDD:275380 2/4 (50%)
leucine-rich repeat 334..348 CDD:275378
PLN00113 359..>824 CDD:215061 124/489 (25%)
leucine-rich repeat 360..383 CDD:275380 5/22 (23%)
leucine-rich repeat 384..407 CDD:275380 7/25 (28%)
leucine-rich repeat 408..431 CDD:275380 10/23 (43%)
leucine-rich repeat 432..455 CDD:275380 8/22 (36%)
leucine-rich repeat 456..476 CDD:275380 7/19 (37%)
leucine-rich repeat 480..501 CDD:275380 7/20 (35%)
leucine-rich repeat 505..517 CDD:275378 4/11 (36%)
leucine-rich repeat 525..550 CDD:275380 1/24 (4%)
leucine-rich repeat 551..574 CDD:275380 9/25 (36%)
leucine-rich repeat 575..598 CDD:275380 9/37 (24%)
leucine-rich repeat 599..622 CDD:275380 4/22 (18%)
leucine-rich repeat 623..646 CDD:275380 6/22 (27%)
leucine-rich repeat 647..670 CDD:275380 4/22 (18%)
leucine-rich repeat 671..693 CDD:275380 12/24 (50%)
leucine-rich repeat 694..717 CDD:275380 6/22 (27%)
leucine-rich repeat 718..741 CDD:275380 3/22 (14%)
leucine-rich repeat 742..763 CDD:275380 5/20 (25%)
leucine-rich repeat 766..789 CDD:275380 3/22 (14%)
leucine-rich repeat 790..813 CDD:275380 2/22 (9%)
leucine-rich repeat 814..835 CDD:275380 5/20 (25%)
leucine-rich repeat 838..861 CDD:275380 11/23 (48%)
leucine-rich repeat 862..885 CDD:275380 1/22 (5%)
NrrosNP_666181.3 LRR 1. /evidence=ECO:0000255 58..79 1/1 (100%)
leucine-rich repeat 60..82 CDD:275380 2/4 (50%)
LRR 2. /evidence=ECO:0000255 82..103 5/20 (25%)
leucine-rich repeat 83..106 CDD:275380 5/22 (23%)
LRR <106..414 CDD:443914 97/345 (28%)
LRR 3. /evidence=ECO:0000255 106..127 5/20 (25%)
leucine-rich repeat 107..133 CDD:275380 7/25 (28%)
LRR 4. /evidence=ECO:0000255 133..155 8/21 (38%)
leucine-rich repeat 134..158 CDD:275380 10/23 (43%)
LRR 5. /evidence=ECO:0000255 158..179 6/20 (30%)
leucine-rich repeat 159..182 CDD:275380 8/22 (36%)
LRR 6. /evidence=ECO:0000255 182..203 7/20 (35%)
leucine-rich repeat 183..206 CDD:275380 7/22 (32%)
LRR 7. /evidence=ECO:0000255 206..227 7/20 (35%)
leucine-rich repeat 207..251 CDD:275380 15/50 (30%)
LRR 8. /evidence=ECO:0000255 228..239 5/13 (38%)
leucine-rich repeat 230..249 CDD:275380 7/25 (28%)
LRR 9. /evidence=ECO:0000255 251..272 8/39 (21%)
leucine-rich repeat 252..273 CDD:275380 9/25 (36%)
LRR 10. /evidence=ECO:0000255 273..294 6/20 (30%)
leucine-rich repeat 274..329 CDD:275380 13/61 (21%)
LRR 276..>595 CDD:443914 96/410 (23%)
LRR 11. /evidence=ECO:0000255 329..350 6/20 (30%)
leucine-rich repeat 330..353 CDD:275380 6/22 (27%)
LRR 12. /evidence=ECO:0000255 353..374 4/20 (20%)
leucine-rich repeat 354..377 CDD:275380 4/22 (18%)
LRR 13. /evidence=ECO:0000255 377..398 9/20 (45%)
leucine-rich repeat 378..403 CDD:275380 12/24 (50%)
LRR 14. /evidence=ECO:0000255 403..424 9/44 (20%)
leucine-rich repeat 404..427 CDD:275380 9/46 (20%)
LRR 15. /evidence=ECO:0000255 427..448 6/31 (19%)
leucine-rich repeat 428..463 CDD:275380 12/70 (17%)
LRR 16. /evidence=ECO:0000255 463..484 6/28 (21%)
leucine-rich repeat 464..486 CDD:275380 5/29 (17%)
LRR 17. /evidence=ECO:0000255 486..507 11/24 (46%)
leucine-rich repeat 487..512 CDD:275380 13/47 (28%)
LRR 18. /evidence=ECO:0000255 512..533 7/20 (35%)
leucine-rich repeat 513..537 CDD:275380 7/23 (30%)
LRR 19. /evidence=ECO:0000255 537..558 9/39 (23%)
leucine-rich repeat 538..559 CDD:275380 8/39 (21%)
LRR 20. /evidence=ECO:0000255 559..580 3/10 (30%)
LRR 21. /evidence=ECO:0000255 585..605
Blue background indicates that the domain is not in the aligned region.

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