DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and lron-14

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_001255400.1 Gene:lron-14 / 188075 WormBaseID:WBGene00011454 Length:747 Species:Caenorhabditis elegans


Alignment Length:731 Identity:158/731 - (21%)
Similarity:262/731 - (35%) Gaps:208/731 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MMLLPIF-LLLCIGINLIRAESCPPSQAILPCRCSLRGKEIQIWCSHSNLPQIMDGLKAVERNIK 64
            |.:||:. |.|...:.:....:..|||...|.||       |.:..:....|:            
 Worm     1 MSVLPLLHLFLISSLQIAPTATSSPSQFPCPTRC-------QCYADNEQNQQV------------ 46

  Fly    65 GRIDELVLENNQLPALPGRFFGSLQIVRLMLRHNSIERVSNGWLNELENGLVEIFVVE-----PQ 124
                .|:.:..||...      :||:.|                    ..||....::     |:
 Worm    47 ----HLICKWEQLNVT------TLQLAR--------------------PDLVRTLTIKCPYHSPK 81

  Fly   125 LRSIPAESLNGMINMLAITIQSEELKHLPD--FSGLLSLTYLSVQTGALQELPSHLFRHLPKLQH 187
            :.:.|.....|..|:..:.:....:..:|:  |:||..|..|.|:...:.:.|..:|.|:|    
 Worm    82 VSTPPHSLFQGFRNLDRLELDRCLIDTVPEGLFAGLGQLYSLIVKNAKITDFPREIFAHVP---- 142

  Fly   188 IHITGGSGLTRLEAGLFDGLISLKNLDLSHNGLNWIHLRALSRLPNLVSLKLSHNQISDVGMVGR 252
                                 :|..||||.|.|. |...:|..|.||:.|.:|.|   |:|.   
 Worm   143 ---------------------NLMTLDLSGNRLR-IEPYSLRSLQNLIHLDVSDN---DIGF--- 179

  Fly   253 IVKDLEHLKKLRLDNNLITVIEDGSFVDLPNLSELHLNDNRITELQYGAFLRTPQ-LKTIYLQNN 316
                        |.|.||:         |..|..:.:|:|:||.:.   |.|.|: |..:.:::|
 Worm   180 ------------LTNTLIS---------LTKLKVITMNNNKITNID---FRRFPENLTDLSIRHN 220

  Fly   317 LIRRIHPESLLQASGSGVEAVHMYNNEIGHVEAL-RALLDALP-RLRYLDMSGNLLSELPYGALR 379
            |:..||   .:.||...::.:.:..|.:..|..| ...::.|| .|:::|:|.|.|:.|      
 Worm   221 LVSTIH---YVPASARNLKRLDLAGNRMEFVGGLTTGAVNVLPAELKHVDLSNNKLTYL------ 276

  Fly   380 GHGTLEQLHLNHNHLRLIERDALMAMPALRELRMRNNSLSSDLPLPFWNLPGLKGLDLAQNQFAR 444
                       |:|                               .|.:|..|..|||..|....
 Worm   277 -----------HDH-------------------------------AFEHLTNLILLDLKNNSLKE 299

  Fly   445 VDSQLLAGLPSLRRLDLSENGLIELAPNSFRHNPLLET--LNISSNELTKIHSSTLIHLER--LF 505
            |.|...||.....:|.||||.|:    ....|..|:::  .|||..:|..|....::..|:  |.
 Worm   300 VKSSSFAGSKFQVKLFLSENPLL----CHCNHKWLMDSSAKNISIGDLQTIECLNILKPEKKMLL 360

  Fly   506 EVDASYNQLKSVIAGLPRIVERISLKGNQITSLPAAASKDLQLPNLRMLDLSQNRIEQLPRHGFQ 570
            .:..|.|||....:.:..            ........|:.:.           |.|..|.....
 Worm   361 TLAHSRNQLLCKYSNMCE------------ADCECCQKKECEC-----------RFECPPTCKCL 402

  Fly   571 GAMELRVLSLAQN-----ELRQLKDTSFIGIQRLELLHLQENQLGEADERALLPLAELRNLNLQS 630
            .:.::.::..:||     :||..|...|  ...|..||:.:......:...|..|:.||.|.:.:
 Worm   403 RSADVSIVRTSQNIMVCDKLRWDKLGKF--PSPLTQLHMNQTDWKIFETEKLKELSNLRALKITN 465

  Fly   631 NKLEAITDNFFSNNSRLEQLDLSRNLIRSISPTAFDTQRSLEYLDLSGNALLDI-SVGLGNLNNL 694
            :|:.::.....::.:.|..|:::.:.|.|| |.......||.:|.||.|.|..: |..|.:|:.|
 Worm   466 SKMTSVEMEKLTDLANLTHLEITSSAITSI-PETITKLPSLTHLYLSDNPLDQLSSTSLNHLDGL 529

  Fly   695 RDIDLSYNQISRIQSD 710
            :.|.|..| .||...|
 Worm   530 KKIRLGGN-FSRFACD 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380
PCC 891..>936 CDD:188093
leucine-rich repeat 69..89 CDD:275380 3/19 (16%)
leucine-rich repeat 90..113 CDD:275380 1/22 (5%)
LRR 93..530 CDD:443914 97/450 (22%)
leucine-rich repeat 115..138 CDD:275380 5/27 (19%)
leucine-rich repeat 139..160 CDD:275380 4/22 (18%)
leucine-rich repeat 161..184 CDD:275380 6/22 (27%)
leucine-rich repeat 185..209 CDD:275380 0/23 (0%)
leucine-rich repeat 210..233 CDD:275380 10/22 (45%)
leucine-rich repeat 234..259 CDD:275380 6/24 (25%)
leucine-rich repeat 260..283 CDD:275380 5/22 (23%)
leucine-rich repeat 284..307 CDD:275380 7/22 (32%)
leucine-rich repeat 308..359 CDD:275380 12/52 (23%)
leucine-rich repeat 334..348 CDD:275378 1/13 (8%)
PLN00113 359..>824 CDD:215061 80/362 (22%)
leucine-rich repeat 360..383 CDD:275380 6/22 (27%)
leucine-rich repeat 384..407 CDD:275380 2/22 (9%)
leucine-rich repeat 408..431 CDD:275380 2/22 (9%)
leucine-rich repeat 432..455 CDD:275380 9/22 (41%)
leucine-rich repeat 456..476 CDD:275380 6/19 (32%)
leucine-rich repeat 480..501 CDD:275380 5/22 (23%)
leucine-rich repeat 505..517 CDD:275378 4/11 (36%)
leucine-rich repeat 525..550 CDD:275380 1/24 (4%)
leucine-rich repeat 551..574 CDD:275380 3/22 (14%)
leucine-rich repeat 575..598 CDD:275380 6/27 (22%)
leucine-rich repeat 599..622 CDD:275380 5/22 (23%)
leucine-rich repeat 623..646 CDD:275380 4/22 (18%)
leucine-rich repeat 647..670 CDD:275380 6/22 (27%)
leucine-rich repeat 671..693 CDD:275380 9/22 (41%)
leucine-rich repeat 694..717 CDD:275380 7/17 (41%)
leucine-rich repeat 718..741 CDD:275380
leucine-rich repeat 742..763 CDD:275380
leucine-rich repeat 766..789 CDD:275380
leucine-rich repeat 790..813 CDD:275380
leucine-rich repeat 814..835 CDD:275380
leucine-rich repeat 838..861 CDD:275380
leucine-rich repeat 862..885 CDD:275380
lron-14NP_001255400.1 leucine-rich repeat 98..119 CDD:275380 4/20 (20%)
LRR <114..370 CDD:443914 89/366 (24%)
leucine-rich repeat 120..143 CDD:275380 7/47 (15%)
leucine-rich repeat 144..166 CDD:275380 10/22 (45%)
leucine-rich repeat 167..189 CDD:275380 11/48 (23%)
leucine-rich repeat 190..211 CDD:275380 8/23 (35%)
leucine-rich repeat 212..234 CDD:275380 7/24 (29%)
leucine-rich repeat 235..261 CDD:275380 4/25 (16%)
leucine-rich repeat 263..286 CDD:275380 10/70 (14%)
leucine-rich repeat 287..310 CDD:275380 9/22 (41%)
leucine-rich repeat 349..404 CDD:275380 10/77 (13%)
LRR <450..>537 CDD:443914 25/87 (29%)
leucine-rich repeat 458..481 CDD:275380 4/22 (18%)
leucine-rich repeat 482..504 CDD:275380 6/22 (27%)
leucine-rich repeat 505..526 CDD:275380 8/20 (40%)
Blue background indicates that the domain is not in the aligned region.

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