DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment atk and lron-15

DIOPT Version :9

Sequence 1:NP_001262113.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:NP_495322.3 Gene:lron-15 / 174079 WormBaseID:WBGene00016974 Length:1275 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_001262113.1 leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
LRR_8 183..244 CDD:290566
leucine-rich repeat 185..209 CDD:275380
LRR_4 209..247 CDD:289563
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..259 CDD:275380
LRR_RI 250..492 CDD:238064
LRR_8 259..318 CDD:290566
leucine-rich repeat 260..283 CDD:275380
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..359 CDD:275380
leucine-rich repeat 334..348 CDD:275378
LRR_8 358..418 CDD:290566
leucine-rich repeat 360..383 CDD:275380
leucine-rich repeat 384..407 CDD:275380
LRR_8 406..466 CDD:290566
leucine-rich repeat 408..431 CDD:275380
leucine-rich repeat 432..455 CDD:275380
LRR_RI 447..705 CDD:238064
LRR_8 454..514 CDD:290566
leucine-rich repeat 456..476 CDD:275380
leucine-rich repeat 480..501 CDD:275380
leucine-rich repeat 505..517 CDD:275378
leucine-rich repeat 525..550 CDD:275380
LRR_8 549..609 CDD:290566
leucine-rich repeat 551..574 CDD:275380
leucine-rich repeat 575..598 CDD:275380
leucine-rich repeat 599..622 CDD:275380
LRR_8 622..681 CDD:290566
leucine-rich repeat 623..646 CDD:275380
LRR_RI 647..896 CDD:238064
leucine-rich repeat 647..670 CDD:275380
leucine-rich repeat 671..693 CDD:275380
leucine-rich repeat 694..717 CDD:275380
LRR_8 716..776 CDD:290566
leucine-rich repeat 718..741 CDD:275380
leucine-rich repeat 742..763 CDD:275380
LRR_8 765..824 CDD:290566
leucine-rich repeat 766..789 CDD:275380
leucine-rich repeat 790..813 CDD:275380
leucine-rich repeat 814..835 CDD:275380
leucine-rich repeat 838..861 CDD:275380
LRR_8 862..921 CDD:290566
leucine-rich repeat 862..885 CDD:275380
leucine-rich repeat 886..906 CDD:275380
TPKR_C2 919..>946 CDD:301599
lron-15NP_495322.3 LRR_8 95..155 CDD:290566
leucine-rich repeat 120..144 CDD:275380
LRR_RI <144..348 CDD:238064
LRR_8 144..205 CDD:290566
leucine-rich repeat 145..168 CDD:275380
leucine-rich repeat 169..194 CDD:275380
leucine-rich repeat 195..217 CDD:275380
LRR_8 217..274 CDD:290566
leucine-rich repeat 218..239 CDD:275380
leucine-rich repeat 240..263 CDD:275380
leucine-rich repeat 264..311 CDD:275380
LRR_8 289..346 CDD:290566
leucine-rich repeat 312..335 CDD:275380
leucine-rich repeat 336..356 CDD:275380
LRR_RI <338..498 CDD:238064
leucine-rich repeat 361..383 CDD:275380
leucine-rich repeat 384..405 CDD:275380
LRR_8 408..473 CDD:290566
leucine-rich repeat 409..432 CDD:275380
leucine-rich repeat 433..462 CDD:275380
LRR_8 461..522 CDD:290566
leucine-rich repeat 463..487 CDD:275380
leucine-rich repeat 488..511 CDD:275380
LRR_8 510..568 CDD:290566
LRR_4 510..551 CDD:289563
leucine-rich repeat 512..533 CDD:275380
LRR_4 533..573 CDD:289563
leucine-rich repeat 534..557 CDD:275380
leucine-rich repeat 558..581 CDD:275380
LRR_8 583..642 CDD:290566
leucine-rich repeat 584..607 CDD:275380
LRR_RI <607..799 CDD:238064
leucine-rich repeat 608..631 CDD:275380
LRR_8 630..688 CDD:290566
leucine-rich repeat 632..655 CDD:275380
leucine-rich repeat 656..676 CDD:275380
leucine-rich repeat 680..703 CDD:275380
leucine-rich repeat 704..749 CDD:275380
leucine-rich repeat 726..739 CDD:275378
LRR_8 748..808 CDD:290566
leucine-rich repeat 750..771 CDD:275380
leucine-rich repeat 774..797 CDD:275380
LRR_8 797..856 CDD:290566
LRR_RI <798..982 CDD:238064
leucine-rich repeat 798..845 CDD:275380
LRR_8 845..904 CDD:290566
leucine-rich repeat 846..869 CDD:275380
leucine-rich repeat 870..893 CDD:275380
leucine-rich repeat 894..915 CDD:275380
LRR_8 938..998 CDD:290566
leucine-rich repeat 940..963 CDD:275380
leucine-rich repeat 964..987 CDD:275380
leucine-rich repeat 988..1009 CDD:275380
leucine-rich repeat 1038..1064 CDD:275380
leucine-rich repeat 1113..1139 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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