DRSC/TRiP Functional Genomics Resources

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Protein Alignment atk and lrrc32.2

DIOPT Version :10

Sequence 1:NP_649228.1 Gene:atk / 40266 FlyBaseID:FBgn0036995 Length:1535 Species:Drosophila melanogaster
Sequence 2:XP_031747547.1 Gene:lrrc32.2 / 100496842 XenbaseID:XB-GENE-6461207 Length:682 Species:Xenopus tropicalis


Alignment Length:679 Identity:178/679 - (26%)
Similarity:288/679 - (42%) Gaps:161/679 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   357 LPR-LRYLDMSGNLLSELPYGALRGHGTLEQLHLNHNHLRLIERDALMAMPALRELRMRNNSLSS 420
            ||| ::.||:|.||::::....:....:|:.|.|.:|.|..|:|.|.:|:..|..|.:..|.|..
 Frog    40 LPRSIKTLDLSHNLITKITVSPISHLHSLQSLSLGYNQLEEIDRGAFLAVTQLDTLNLAANQLHK 104

  Fly   421 DLPL---PFWNLPGLKGLDLAQNQFARVDSQL----LAGLPSLRRLDLSENGLIELAPNSFRHNP 478
            ....   .|.:||.||.|.||||   .:||::    |.|..||::||||.|.::.|:|.:|....
 Frog   105 HYQRHDGVFASLPNLKILSLAQN---HLDSKMVTFYLNGSRSLKKLDLSGNKMVTLSPGTFDGAL 166

  Fly   479 LLETLNISSNELTKIHSSTLIHLERLFEVDASYNQLKSVIAGLPRIVERISLKGNQITSLPAAA- 542
            .|..|::::|::|.|...|...|:.|..::.:.|.::.:.:        ..|...|:.:|.:.| 
 Frog   167 HLTELDLANNDITGITEGTFDALQNLRTLNLAGNFIQCIAS--------FDLTQLQVLNLSSNAL 223

  Fly   543 ----SKDLQLP-NLRMLDLSQNRIEQLPRHGFQGAMELRVLSLAQNELRQLKDTSFIGIQRLELL 602
                |.|.|.| .|..||||||.:::.|  ......:::.|:|:.|.|.::...|...::.:|..
 Frog   224 RFFYSNDSQTPYQLSTLDLSQNNLKRFP--FLPNIHKIQYLNLSGNNLVEMAPGSETTLENVESS 286

  Fly   603 HLQENQLG----EADERALLPLAELRNLNLQSNKLEAITDNFFSNNSRLEQLDLSRNLI------ 657
            |..|...|    .|.|.:...|:.||:|:|..|.|.:...:|.||.:|||.|:|:.|.|      
 Frog   287 HWFEAAEGLDLFSAIEYSNYNLSHLRDLDLSHNHLTSFPSHFLSNATRLENLNLAHNCITYMREE 351

  Fly   658 --RSISPTAFD------TQRSLEYLDLSGNALLDISVGLGN-LNNLRDIDLSYNQ-ISRIQS--- 709
              .::|....|      |..:|:.|:|.||::..:...|.. |.|::.::|..|. |.|.||   
 Frog   352 PSSTVSSQVKDWTHIPVTLNALKVLNLEGNSIQTVPQWLFKFLPNIQHLNLKGNNVILRPQSHPK 416

  Fly   710 --------DVIGGWRNVVEIR---LSNNLIVELQQGTFRNLPKLQYLDLSSNEIRNVEPGALKGL 763
                    |:...:....:::   |.:|.|.:|....|.:.| |..||||.|....:|...::||
 Frog   417 MINGSSKDDICTNFSRAPKLKYLNLGHNYITQLPPRAFHHTP-LAVLDLSENLGLTLEESTMEGL 480

  Fly   764 DELQEFV-LADNKLVELKDHVFEELPSLLASHFQYNKLRYISPESFHNANSLVFLNLSNNHFRNM 827
            :|..:|: |..|::.|.:    .:||.|                     .||.|||:|||..|  
 Frog   481 EESLQFLSLQGNQMNESQ----AKLPCL---------------------KSLQFLNMSNNKLR-- 518

  Fly   828 ENIGLRSMRNLEVLDLSTNGVKLVSTMPLKALNWLVELKMDNNQICRIQGSPFETMPRLRVLSMR 892
                                     .:|.             |..|          ..:.::.:|
 Frog   519 -------------------------ALPA-------------NLYC----------SHVDIVDLR 535

  Fly   893 NNQLRSIKERTFRNVRGNIAILDVDGNPIDCNCEMQWLSVWLQETNFPYPGPKCQDGRLLRSARM 957
            ||.||.:..:.......::..|.:.|||..| |.:.||.: ||      .||       :|...:
 Frog   536 NNDLRMLDNKAALAWASSLTHLYIKGNPFSC-CSLNWLKI-LQ------AGP-------VRIWDL 585

  Fly   958 ERSLCVGADIYGNERTDGNQLPLLNEHGD 986
            |.:.|    ||    .|.|.....|..||
 Frog   586 EEAHC----IY----LDNNSTGKANVTGD 606

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
atkNP_649228.1 leucine-rich repeat 886..906 CDD:275380 5/19 (26%)
PCC 891..>936 CDD:188093 14/44 (32%)
leucine-rich repeat 69..89 CDD:275380
leucine-rich repeat 90..113 CDD:275380
LRR 93..530 CDD:443914 54/180 (30%)
leucine-rich repeat 115..138 CDD:275380
leucine-rich repeat 139..160 CDD:275380
leucine-rich repeat 161..184 CDD:275380
leucine-rich repeat 185..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..259 CDD:275380
leucine-rich repeat 260..283 CDD:275380
leucine-rich repeat 284..307 CDD:275380
leucine-rich repeat 308..359 CDD:275380 1/1 (100%)
leucine-rich repeat 334..348 CDD:275378
PLN00113 359..>824 CDD:215061 145/513 (28%)
leucine-rich repeat 360..383 CDD:275380 5/22 (23%)
leucine-rich repeat 384..407 CDD:275380 9/22 (41%)
leucine-rich repeat 408..431 CDD:275380 6/25 (24%)
leucine-rich repeat 432..455 CDD:275380 11/26 (42%)
leucine-rich repeat 456..476 CDD:275380 9/19 (47%)
leucine-rich repeat 480..501 CDD:275380 6/20 (30%)
leucine-rich repeat 505..517 CDD:275378 1/11 (9%)
leucine-rich repeat 525..550 CDD:275380 8/30 (27%)
leucine-rich repeat 551..574 CDD:275380 8/22 (36%)
leucine-rich repeat 575..598 CDD:275380 5/22 (23%)
leucine-rich repeat 599..622 CDD:275380 7/26 (27%)
leucine-rich repeat 623..646 CDD:275380 9/22 (41%)
leucine-rich repeat 647..670 CDD:275380 9/36 (25%)
leucine-rich repeat 671..693 CDD:275380 7/22 (32%)
leucine-rich repeat 694..717 CDD:275380 7/34 (21%)
leucine-rich repeat 718..741 CDD:275380 5/25 (20%)
leucine-rich repeat 742..763 CDD:275380 7/20 (35%)
leucine-rich repeat 766..789 CDD:275380 5/23 (22%)
leucine-rich repeat 790..813 CDD:275380 1/22 (5%)
leucine-rich repeat 814..835 CDD:275380 8/20 (40%)
leucine-rich repeat 838..861 CDD:275380 1/22 (5%)
leucine-rich repeat 862..885 CDD:275380 2/22 (9%)
lrrc32.2XP_031747547.1 leucine-rich repeat 25..43 CDD:275380 2/2 (100%)
LRR 31..>343 CDD:443914 96/315 (30%)
leucine-rich repeat 45..67 CDD:275380 5/21 (24%)
leucine-rich repeat 68..91 CDD:275380 9/22 (41%)
leucine-rich repeat 92..118 CDD:275380 6/25 (24%)
leucine-rich repeat 119..143 CDD:275380 11/26 (42%)
leucine-rich repeat 144..167 CDD:275380 9/22 (41%)
leucine-rich repeat 168..191 CDD:275380 7/22 (32%)
leucine-rich repeat 192..212 CDD:275380 3/27 (11%)
leucine-rich repeat 213..236 CDD:275380 7/22 (32%)
leucine-rich repeat 237..258 CDD:275380 8/22 (36%)
leucine-rich repeat 259..280 CDD:275380 5/20 (25%)
leucine-rich repeat 335..372 CDD:275380 9/36 (25%)
LRR <370..>577 CDD:443914 65/290 (22%)
leucine-rich repeat 373..396 CDD:275380 7/22 (32%)
leucine-rich repeat 436..456 CDD:275380 5/19 (26%)
leucine-rich repeat 459..483 CDD:275380 9/23 (39%)
leucine-rich repeat 484..506 CDD:275380 7/46 (15%)
leucine-rich repeat 507..528 CDD:275380 11/70 (16%)
leucine-rich repeat 529..553 CDD:275380 5/23 (22%)
leucine-rich repeat 554..573 CDD:275380 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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