DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hpd and hpd

DIOPT Version :9

Sequence 1:NP_730536.1 Gene:Hpd / 40263 FlyBaseID:FBgn0036992 Length:380 Species:Drosophila melanogaster
Sequence 2:NP_001072376.1 Gene:hpd / 779829 XenbaseID:XB-GENE-955609 Length:393 Species:Xenopus tropicalis


Alignment Length:382 Identity:252/382 - (65%)
Similarity:305/382 - (79%) Gaps:3/382 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTSYTDKGTKPEAGKFLSFDHLTFYVGNAKQAASYYTTRLGFEPLGYQGLETGERRFAKHAVRQN 65
            ||||||||.|.|.|:||||..:|.:|.|||||||:|..:||||||.|:|||||.|:...|.|:|:
 Frog     1 MTSYTDKGEKHEQGRFLSFHSVTLWVSNAKQAASFYCNKLGFEPLAYKGLETGSRKLVTHVVKQD 65

  Fly    66 KIVFVFVSAYTPDDEEHGLHLMRHGDGVKDVAFEVEDLNAIFTLAVSRGAEVVRDIWEESDDQGF 130
            ||:.:||||.||.:||.|.||.:||||||||||||||...:...|..|||.:|::.|.|.|..|.
 Frog    66 KIILLFVSALTPGNEEFGAHLQKHGDGVKDVAFEVEDCEFLVQKARQRGAVIVKEPWVEEDKFGK 130

  Fly   131 VRFATIKTYGDTTHTFVERNGYAGDFLPGFQRSP--KDVLLNGLPSTKLNFIDHVVGNQPDLQME 193
            |:||.::||||||||.||:.||.|.||||:: .|  :|.||..||..|||||||:||||||.:|.
 Frog   131 VKFAIVQTYGDTTHTLVEKLGYNGIFLPGYE-PPLFQDPLLPKLPDCKLNFIDHIVGNQPDDEMV 194

  Fly   194 SVASWYERILQFHRFWSVDDSQIHTEYSALRSIVMANYEETVKMPINEPANGKKKSQIQEYVEYY 258
            |||.||::.|.|||||||||.|:|||:|||||||:||||||:||||||||.|||:|||||||:||
 Frog   195 SVADWYQKALLFHRFWSVDDKQLHTEFSALRSIVVANYEETIKMPINEPAPGKKRSQIQEYVDYY 259

  Fly   259 GGGGVQHIALNTDDIIEAVSNLKARGTEFLTIPSSYYEILQEQLSHSRTKIKEDMEVLKKLNILI 323
            ||.|||||||||.|||.|||||:.||.||:::||:||:.|:|.|..::.|:.||::.|::|.||:
 Frog   260 GGPGVQHIALNTSDIITAVSNLQERGMEFMSVPSAYYQTLRENLKTAKIKVAEDIDKLEELKILV 324

  Fly   324 DFDENGYLLQIFTKNCQDRPTLFLEVIQRYNHNGFGAGNFKSLFTAIEIEQAKRGNL 380
            |:|:||||||||||..|||||||.|||||:||.|||||||||||.|||.:||.||||
 Frog   325 DYDDNGYLLQIFTKPVQDRPTLFFEVIQRHNHQGFGAGNFKSLFQAIEADQAARGNL 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HpdNP_730536.1 4HPPD 17..380 CDD:273528 238/364 (65%)
hpdNP_001072376.1 4HPPD 17..381 CDD:273528 238/364 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 235 1.000 Domainoid score I2317
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1620
Inparanoid 1 1.050 518 1.000 Inparanoid score I1255
OMA 1 1.010 - - QHG63570
OrthoDB 1 1.010 - - D1087836at2759
OrthoFinder 1 1.000 - - FOG0004104
OrthoInspector 1 1.000 - - otm47514
Panther 1 1.100 - - O PTHR11959
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2577
SonicParanoid 1 1.000 - - X2845
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1212.200

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